Gene
| Gene Model ID | pfu_aug1.0_1465.1_22603 |
|---|---|
| Locus | scaffold1465.1 : 25368 ... 65033 : - |
| To GenomeBrowser | scaffold1465.1:25368..65033 |
| Genes list of scaffold | scaffold1465.1 |
| Synonym | pfu_aug2.0_216.1_20445 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1465.1_22603.t1 | 7 | 1 | zf-H2C2_2 | 157 | 165 | 1.5e-11 | 44.0 | 0.1 | 170.0 | 2.7 |
| pfu_aug1.0_1465.1_22603.t1 | 7 | 1 | zf-C2H2 | 158 | 179 | 6.3e-15 | 54.5 | 0.0034 | 5.6 | 7.5 |
| pfu_aug1.0_1465.1_22603.t1 | 7 | 1 | zf-C2H2_4 | 158 | 179 | 1.1e-13 | 50.4 | 0.00013 | 0.22 | 11.9 |
| pfu_aug1.0_1465.1_22603.t1 | 5 | 1 | zf-H2C2_5 | 158 | 176 | 3.4e-08 | 33.2 | 0.98 | 1600.0 | -0.4 |
| pfu_aug1.0_1465.1_22603.t1 | 7 | 2 | zf-H2C2_2 | 172 | 191 | 1.5e-11 | 44.0 | 0.53 | 870.0 | 0.5 |
| pfu_aug1.0_1465.1_22603.t1 | 7 | 2 | zf-C2H2 | 185 | 207 | 6.3e-15 | 54.5 | 0.011 | 18.0 | 5.9 |
| pfu_aug1.0_1465.1_22603.t1 | 7 | 2 | zf-C2H2_4 | 185 | 207 | 1.1e-13 | 50.4 | 0.0045 | 7.5 | 7.1 |
| pfu_aug1.0_1465.1_22603.t1 | 5 | 2 | zf-H2C2_5 | 185 | 208 | 3.4e-08 | 33.2 | 1.1e-06 | 0.0018 | 18.3 |
| pfu_aug1.0_1465.1_22603.t1 | 7 | 3 | zf-H2C2_2 | 202 | 217 | 1.5e-11 | 44.0 | 0.3 | 490.0 | 1.3 |
| pfu_aug1.0_1465.1_22603.t1 | 7 | 3 | zf-C2H2 | 211 | 232 | 6.3e-15 | 54.5 | 0.0018 | 3.0 | 8.3 |
| pfu_aug1.0_1465.1_22603.t1 | 7 | 3 | zf-C2H2_4 | 211 | 232 | 1.1e-13 | 50.4 | 0.0017 | 2.7 | 8.5 |
| pfu_aug1.0_1465.1_22603.t1 | 5 | 3 | zf-H2C2_5 | 212 | 231 | 3.4e-08 | 33.2 | 0.0012 | 1.9 | 8.8 |
| pfu_aug1.0_1465.1_22603.t1 | 7 | 4 | zf-H2C2_2 | 226 | 247 | 1.5e-11 | 44.0 | 0.00087 | 1.4 | 9.3 |
| pfu_aug1.0_1465.1_22603.t1 | 7 | 4 | zf-C2H2 | 238 | 260 | 6.3e-15 | 54.5 | 4.3e-06 | 0.0071 | 16.6 |
| pfu_aug1.0_1465.1_22603.t1 | 7 | 4 | zf-C2H2_4 | 238 | 260 | 1.1e-13 | 50.4 | 7.6e-05 | 0.13 | 12.7 |
| pfu_aug1.0_1465.1_22603.t1 | 7 | 5 | zf-H2C2_2 | 252 | 278 | 1.5e-11 | 44.0 | 2.3e-05 | 0.038 | 14.2 |
| pfu_aug1.0_1465.1_22603.t1 | 7 | 5 | zf-C2H2 | 267 | 289 | 6.3e-15 | 54.5 | 7.4e-09 | 1.2e-05 | 25.3 |
| pfu_aug1.0_1465.1_22603.t1 | 7 | 5 | zf-C2H2_4 | 267 | 289 | 1.1e-13 | 50.4 | 3.5e-08 | 5.8e-05 | 23.1 |
| pfu_aug1.0_1465.1_22603.t1 | 5 | 4 | zf-H2C2_5 | 268 | 289 | 3.4e-08 | 33.2 | 0.0014 | 2.4 | 8.5 |
| pfu_aug1.0_1465.1_22603.t1 | 7 | 6 | zf-H2C2_2 | 281 | 303 | 1.5e-11 | 44.0 | 1.5e-10 | 2.5e-07 | 30.6 |
| pfu_aug1.0_1465.1_22603.t1 | 7 | 6 | zf-C2H2 | 295 | 317 | 6.3e-15 | 54.5 | 0.00013 | 0.22 | 11.9 |
| pfu_aug1.0_1465.1_22603.t1 | 7 | 6 | zf-C2H2_4 | 295 | 317 | 1.1e-13 | 50.4 | 0.002 | 3.3 | 8.2 |
| pfu_aug1.0_1465.1_22603.t1 | 5 | 5 | zf-H2C2_5 | 295 | 317 | 3.4e-08 | 33.2 | 2.7e-07 | 0.00045 | 20.2 |
| pfu_aug1.0_1465.1_22603.t1 | 7 | 7 | zf-H2C2_2 | 311 | 333 | 1.5e-11 | 44.0 | 4.2e-05 | 0.07 | 13.4 |
| pfu_aug1.0_1465.1_22603.t1 | 7 | 7 | zf-C2H2 | 322 | 342 | 6.3e-15 | 54.5 | 3.1e-05 | 0.052 | 13.9 |
| pfu_aug1.0_1465.1_22603.t1 | 7 | 7 | zf-C2H2_4 | 322 | 335 | 1.1e-13 | 50.4 | 0.0023 | 3.8 | 8.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1465.1_22603.t1 | gi|241034194|ref|XP_002406654.1| | zinc finger protein, putative [Ixodes scapularis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_1465.1_22603.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1465.1_22603.t1 cagaggtagccagtgacgatgacgggacgaaacaagacattgatgacgaggatgatgatgatgccgctaaggtcatccca agtctacgtagaaaaataaaactagaagtggaaaacaaagacgtccttaatattacaccctatatcactccagtaaatcc agatgttaccatggaaactattacagcagaaaccagtgtagaatgtacaaatgttacacaggaagaaagtgaagatccaa acaaaaatacagaggaggctgatacgtcagtggaggagtctgtaatggtgaaagaagaaatggcatcaccaatgaaaact gtggaagaaacgagccatgatgatactacagagaagcctgactcagaaaggacaattatacagatacctgaaaatctgtt acccatgtttctacctaagaacaatccagtcaaattaggactcaaattctcggagaaagaattagacgagttaaaatgtc agaagtgtgggtaccaagctttctacacccatcagtatcagacccacatagcctctcacgtggatgagacacagaaatgt aaatgctgtagttacgtcacttttgacaaagacagtcttattcagcattttaaggagaatcatccaaggtgcatatgtcc tgagtgtgacttcatggcggagtatgcttatgtgatcaaaagacatatgatgagacatactgccataggatgtacatgtg acatatgtggaaagacatataaagatcagtacatactgaaaatgcacgtcaagatggtacacatgccagcagaggtcctg tttgaatgtacagtgtgttccaagaagtttacacgtaaagcccatctcaaacgtcatctccggattcatgaacccgagaa accatacaaatgcccgcactgcgattacaggggatgtgagagatcagacatatctaaacatatcctgatccatgaggagc cacggcatgtatgtgagatctgtggaaaggccttcagacatatgaaaaataaatttcttcatctcaaaagttacatcgat taa |
|
Protein
| Protein ID | pfu_aug1.0_1465.1_22603.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1465.1_22603.t1 EVASDDDGTKQDIDDEDDDDAAKVIPSLRRKIKLEVENKDVLNITPYITPVNPDVTMETITAETSVECTNVTQEESEDPN KNTEEADTSVEESVMVKEEMASPMKTVEETSHDDTTEKPDSERTIIQIPENLLPMFLPKNNPVKLGLKFSEKELDELKCQ KCGYQAFYTHQYQTHIASHVDETQKCKCCSYVTFDKDSLIQHFKENHPRCICPECDFMAEYAYVIKRHMMRHTAIGCTCD ICGKTYKDQYILKMHVKMVHMPAEVLFECTVCSKKFTRKAHLKRHLRIHEPEKPYKCPHCDYRGCERSDISKHILIHEEP RHVCEICGKAFRHMKNKFLHLKSYID |
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