Gene
| Gene Model ID | pfu_aug1.0_14650.1_61393 |
|---|---|
| Locus | scaffold14650.1 : 1 ... 11785 : - |
| To GenomeBrowser | scaffold14650.1:1..11785 |
| Genes list of scaffold | scaffold14650.1 |
| Synonym | pfu_aug2.0_3980.1_02534 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_14650.1_61393.t1 | 2 | 1 | zf-CW | 12 | 59 | 1.2e-14 | 53.7 | 1.6e-18 | 1.2e-14 | 53.7 |
| pfu_aug1.0_14650.1_61393.t1 | 2 | 1 | ARID | 63 | 73 | 8.9e-09 | 35.0 | 0.6 | 4500.0 | -2.5 |
| pfu_aug1.0_14650.1_61393.t1 | 2 | 2 | zf-CW | 169 | 179 | 1.2e-14 | 53.7 | 0.22 | 1600.0 | -1.2 |
| pfu_aug1.0_14650.1_61393.t1 | 2 | 2 | ARID | 201 | 259 | 8.9e-09 | 35.0 | 3.7e-12 | 2.7e-08 | 33.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_14650.1_61393.t1 | gi|313233641|emb|CBY09812.1| | unnamed protein product [Oikopleura dioica] | 3.0e-16 |
Transcript
| Transcript ID | pfu_aug1.0_14650.1_61393.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_14650.1_61393.t1 atggctgtttatagttgcattatagaggactatacctgggtgcagtgcgacaatctggaatgtcaaaaatggcggaaaat tcccgtagatgacgcagagggactggacgacgtagactggttctgtcatatgaacactgatcccgtacataacacgtgtg agagcgtagaggaggactaccaggcgtacgacagactcgctaagagactcggctataaatatgtgatgtcacacctgact gaaggaacggtggtttgggctaaaatgactggatactgcagttacatgaaccagcagtatgcaaggaacactggtcaaaa ctctcagggtcagaagaaactagaaaatactgtgcctctcaaactttgtaagaaagatcctacagtgtttgaatttaagg actgtaaactgacccccaataagtttgagaacaagacatgtaaattaggaaaaattacaaaccttgaaattcagagaact gtggagaaaccagaagtatgtggcgagttaacaaagtttgaatgctcccatatggagatgaagaacacattagtgaataa gagcaaggaggagagatttaagatagatattgagatgtacaaaagaaatgagaaagcctttgaccatgatttgttcagat ttatggagagaaatgggatgaagatcaagaaaaggccagtctggcacaacacgcctataggtctgttccagctattcttg gcagtgtatgaaagaggtggctaccaacaggcaacagatattgctaaagtgaatgaatttgcaatattgatcaactttaa ttttgtacagaatgattaa |
|
Protein
| Protein ID | pfu_aug1.0_14650.1_61393.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_14650.1_61393.t1 MAVYSCIIEDYTWVQCDNLECQKWRKIPVDDAEGLDDVDWFCHMNTDPVHNTCESVEEDYQAYDRLAKRLGYKYVMSHLT EGTVVWAKMTGYCSYMNQQYARNTGQNSQGQKKLENTVPLKLCKKDPTVFEFKDCKLTPNKFENKTCKLGKITNLEIQRT VEKPEVCGELTKFECSHMEMKNTLVNKSKEERFKIDIEMYKRNEKAFDHDLFRFMERNGMKIKKRPVWHNTPIGLFQLFL AVYERGGYQQATDIAKVNEFAILINFNFVQND |
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