Gene
| Gene Model ID | pfu_aug1.0_14719.1_03542 |
|---|---|
| Locus | scaffold14719.1 : 27246 ... 35100 : + |
| To GenomeBrowser | scaffold14719.1:27246..35100 |
| Genes list of scaffold | scaffold14719.1 |
| Synonym | pfu_aug2.0_132.1_06992 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_14719.1_03542.t1 | 3 | 1 | WD40 | 14 | 49 | 2.3e-16 | 58.9 | 3.4e-09 | 2.5e-05 | 23.9 |
| pfu_aug1.0_14719.1_03542.t1 | 3 | 2 | WD40 | 99 | 135 | 2.3e-16 | 58.9 | 4.4e-11 | 3.3e-07 | 29.9 |
| pfu_aug1.0_14719.1_03542.t1 | 3 | 3 | WD40 | 154 | 175 | 2.3e-16 | 58.9 | 0.056 | 410.0 | 1.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_14719.1_03542.t1 | gi|321474269|gb|EFX85234.1| | hypothetical protein DAPPUDRAFT_300247 [Daphnia pulex] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_14719.1_03542.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_14719.1_03542.t1 atgaaactcacagataatgtagttcgaaattttaaagttgccaagatattccgggaaaatacagacagaataaatagaat agatttctctacatgtggaaataccttaatttcaagcagtgatgacgattctatcgttatctacgattgccaaaatggaa caccaaagaagactttgaatagcaagaaatatggagtggatctcatatgttatacacatgctgtgaatactgctctccat ggatcaactaaagttgatgacaccattcgttatctctctctccatgacaacaagtatatcagatactttccaggccacac aaaaaaagttgtctccctgaacatgtctccgatcaacgattcctttctctctggatcattagacaaaacaattcgactct gggatctgaggtcacaaaactgtcagggcctgatgcatctgccagggcggcctgtagcagcctttgaccctgagggcctt atttttgctgctggtatcaactcagaatgtgttaagctttacgatctgaggtccttcgacaga |
|
Protein
| Protein ID | pfu_aug1.0_14719.1_03542.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_14719.1_03542.t1 MKLTDNVVRNFKVAKIFRENTDRINRIDFSTCGNTLISSSDDDSIVIYDCQNGTPKKTLNSKKYGVDLICYTHAVNTALH GSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVSLNMSPINDSFLSGSLDKTIRLWDLRSQNCQGLMHLPGRPVAAFDPEGL IFAAGINSECVKLYDLRSFDR |
|