Gene
| Gene Model ID | pfu_aug1.0_1473.1_65985 |
|---|---|
| Locus | scaffold1473.1 : 9806 ... 32619 : + |
| To GenomeBrowser | scaffold1473.1:9806..32619 |
| Genes list of scaffold | scaffold1473.1 |
| Synonym | pfu_aug2.0_11090.1_03083 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1473.1_65985.t1 | 6 | 1 | Glyco_hydro_1 | 17 | 42 | 0.0 | 1117.1 | 1.1e-12 | 5.4e-09 | 34.7 |
| pfu_aug1.0_1473.1_65985.t1 | 6 | 2 | Glyco_hydro_1 | 41 | 289 | 0.0 | 1117.1 | 0.0 | 0.0 | 215.1 |
| pfu_aug1.0_1473.1_65985.t1 | 6 | 3 | Glyco_hydro_1 | 320 | 523 | 0.0 | 1117.1 | 0.0 | 0.0 | 271.9 |
| pfu_aug1.0_1473.1_65985.t1 | 6 | 4 | Glyco_hydro_1 | 526 | 573 | 0.0 | 1117.1 | 4.8e-16 | 2.4e-12 | 45.8 |
| pfu_aug1.0_1473.1_65985.t1 | 6 | 5 | Glyco_hydro_1 | 571 | 879 | 0.0 | 1117.1 | 0.0 | 0.0 | 314.8 |
| pfu_aug1.0_1473.1_65985.t1 | 6 | 6 | Glyco_hydro_1 | 886 | 1066 | 0.0 | 1117.1 | 0.0 | 0.0 | 261.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1473.1_65985.t1 | gi|296204897|ref|XP_002749525.1| | PREDICTED: lactase-phlorizin hydrolase [Callithrix jacchus] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1473.1_65985.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1473.1_65985.t1 atgggagggcggggaaccgcacccgctgaggaggggaaatttttctacggacaattcccaaatgatttcgtgtggagttc ggccactgcagcctatcaaatcgaaggggcgtggaacgaggacggcgtggttggcattactctgaacatgggatggtcgg aacctaagaatccgtacgaccccacccatcttgaggcgtcagaaagagcagttttgtttgattttggatggtttgcacac cctctggtttacggaaagtacccggatgtgatgacgtggcaggttggcaataagagtctggcacagaattttacagagac cagattgactccgttcactccagacgaagttaaacttatcaacggtaccactgatttccttggtcttaacttctacacgt ccagtttggtttatccccagaagaaatccatcaccgacatcagctatgacgccgataaagataatgggggcgaacaagat cccaaatggaagggatcaggctctggttggctaaaagtcactccatttggcttacgtaaaactttaaactggatcaagca tcattataacaatatggacgtctacgtcacagaaaatggcgtctcagacaatacaggcactctgcacgacattcccagag tagatttctataggtcatatattgacgagatgttgaaagccgtggtgctggatgaatgcaatgtgaagggttacacggcg tggtcactgatggataacttggaatggaaggcaacgtatgcagagaagttcggacttcactatgtcaacttttctgaccc agaacggaccaggacacccaaactgtcggcagctttctacaaccaagtcattaaagacaacggatttctgagtgatgaag cgttaactgctcctgggaacatagagaagctcggcttatatcgcaatctaccttatgacaaggagttctactacggcatc ttcccggatgaattcaaatggggcgtgtccacagctgcctatcaagtagagggggcgtggaatgaagatggtaaaggtga gagtgtgatggataagcttatacacgcggcacatcaacaaggagtgctgaagcataacgatacgggagatgtcacgtgtg acagttatcatagataccaggacgatgtcggcatgctcactgaacttggagttcatcattaccgcttctccatagcctgg tccaggttgcttccggacggtactgtaggttctttgaaccagcccggggttgactattatacacacctgattgatgcatt gattgatgcagacattgaaccaatggtaacgctgaaccacttcgatctcccacaatccctggaaaactatggcggatggt tcaacgaaagcactgctgaccgctttacagattttgctcgtgtttgctttaaactatttggagataaggtgaagacatgg attacttttaatgaaccatacgtgctagccgtattgatggaaggtgttcccagcgtaaagccgtacctcacagctcacaa cgtaataaaggcacacgcaaaagcatatcatgtgtataacaacgagttcagaagtaaacagaaaggaaaaggactaagta tatgggacgacttttcacatcgtggtaaaattgacttgaatcataccggtgacattgcatgcgatagctaccataagtat ttggatgatatacaacttatgaaaaacatgaaggtaaagttctggatcacatttaacgagccttgggttgtgtctgttct tggttacgagcaggcaagtatggcccccggtattaccggaaaaggagataaactctatgtcgtcactcataacttactga aggcacacgctaaggcctaccatctctatgacaagaacttcagaacccaacaaaaaggacaagttggaatcacgcttaat acggattggcaggtaccaatgaatccgaaagatcagaatgatagggatatgtcagatcgcgccatctactttatgtttgg ttggtttgctgaacccgttattaagggagattatccgcaagttatgaaagattttattggaaagaaaagtagcgaacagg gattggccaagagtagacttccagaatttacagatgaggagaaaaaatatatgaaaaatacctatgatttcctgggaatg aacttttacacatccaataccatcaaatataagaagttctcagccaatgattcttcctacgatcacgacaaagacttgga ctttggcaaggatccttcgtggctggggtccggatcatcttggctgaaggtgacaccatttggaatacgacgcatgttga attgggtcaagtataagtatggcgatatacccatttatattactgaaaacggaatctctgacagaaacggatcactgaat gaccaacaccgaatattttactacaagcattatataaacaacgtactgaaagccataagggtagacggcgttgacgtccg tggttacacagcatggtcgttgatggataattttgaatggatgagaggttacacagagagatttggtctccattacgtga actttaccgatcccaaccgtcccagaactcctaaagcttctgccaggtattataagaaacttatagcagacaatggcttt atcagagaagatgcaacaaacggaggtaaaggactaagtatatgggatgactactcacatcgtggtatgattgacatgaa ccataccggtgacgtagcctgtgatagctaccacaaatacatggaagatgtgcagcttatgaaaaatatggggacgaccc attttcggttctcaatatcatggccaagagttttgccaaacggcaccatagacaatataaacgagctcggaatcgattat tacaacaagcttatcaacgctctagtagaagctggaatcgttcccatggttaccctgtaccactgggatctcccattaga cctcatgaaaaatggcggatggcaggatccggaagttgttgatcacttcgtagattatgcaagactttgtttccaacgtt ttggtgacagggtgaagtactggatcacctttaatgagccttgggttgtgtcagttcaggggtatgaacagggatataag gcacccggtataactggcaagggagataaactctacatcgtcacacacaacatattaaaggcgcatgccaaggtatcacc ccaaaaattggacggaaaactgcatcattgcgcgtag |
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Protein
| Protein ID | pfu_aug1.0_1473.1_65985.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1473.1_65985.t1 MGGRGTAPAEEGKFFYGQFPNDFVWSSATAAYQIEGAWNEDGVVGITLNMGWSEPKNPYDPTHLEASERAVLFDFGWFAH PLVYGKYPDVMTWQVGNKSLAQNFTETRLTPFTPDEVKLINGTTDFLGLNFYTSSLVYPQKKSITDISYDADKDNGGEQD PKWKGSGSGWLKVTPFGLRKTLNWIKHHYNNMDVYVTENGVSDNTGTLHDIPRVDFYRSYIDEMLKAVVLDECNVKGYTA WSLMDNLEWKATYAEKFGLHYVNFSDPERTRTPKLSAAFYNQVIKDNGFLSDEALTAPGNIEKLGLYRNLPYDKEFYYGI FPDEFKWGVSTAAYQVEGAWNEDGKGESVMDKLIHAAHQQGVLKHNDTGDVTCDSYHRYQDDVGMLTELGVHHYRFSIAW SRLLPDGTVGSLNQPGVDYYTHLIDALIDADIEPMVTLNHFDLPQSLENYGGWFNESTADRFTDFARVCFKLFGDKVKTW ITFNEPYVLAVLMEGVPSVKPYLTAHNVIKAHAKAYHVYNNEFRSKQKGKGLSIWDDFSHRGKIDLNHTGDIACDSYHKY LDDIQLMKNMKVKFWITFNEPWVVSVLGYEQASMAPGITGKGDKLYVVTHNLLKAHAKAYHLYDKNFRTQQKGQVGITLN TDWQVPMNPKDQNDRDMSDRAIYFMFGWFAEPVIKGDYPQVMKDFIGKKSSEQGLAKSRLPEFTDEEKKYMKNTYDFLGM NFYTSNTIKYKKFSANDSSYDHDKDLDFGKDPSWLGSGSSWLKVTPFGIRRMLNWVKYKYGDIPIYITENGISDRNGSLN DQHRIFYYKHYINNVLKAIRVDGVDVRGYTAWSLMDNFEWMRGYTERFGLHYVNFTDPNRPRTPKASARYYKKLIADNGF IREDATNGGKGLSIWDDYSHRGMIDMNHTGDVACDSYHKYMEDVQLMKNMGTTHFRFSISWPRVLPNGTIDNINELGIDY YNKLINALVEAGIVPMVTLYHWDLPLDLMKNGGWQDPEVVDHFVDYARLCFQRFGDRVKYWITFNEPWVVSVQGYEQGYK APGITGKGDKLYIVTHNILKAHAKVSPQKLDGKLHHCA |
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