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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_1473.1_65986
Locus scaffold1473.1 : 33790 ... 39119 : -
To GenomeBrowser scaffold1473.1:33790..39119
Genes list of scaffold scaffold1473.1
Synonym pfu_aug2.0_204.1_13780

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_1473.1_65986.t1 gi|195352576|ref|XP_002042788.1| GM17674 [Drosophila sechellia] 9.0e-11

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
egg-4cell 1
8-16cell 1
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_1473.1_65986.t1
Definition-
>pfu_aug1.0_1473.1_65986.t1
ttgtcagcgcagaatggcctcgcgatttgtcaaccagtaaccaggatgtgcttgacgaattggaaagagaagtggaatat
cgtgaagccccagctgaagaggataccacggaagacggtgatacggtagctaccgatatccctccagaagacacgactga
tgaaacaaacccaacgacaccgacttatattcctccgccagatgaaacaaccgcagcaccaactgatatccctccgccag
aagaaacaaccgcagcgccaactgatatacctccgccagacgagacaacggtaaaaccaaccgatatccctccacctgtt
gaaacaaccgcagcaccaactgatatccctccgccagatgaaacgacggcagcaccgactgatatccctccgccagacga
aacaactgcggcaccaactgtccctcctccaattgaaacaacagcaaaaccaactgatattcctccgccagacgaaacaa
ccgcagcaccgactgatgtccctccaccagatgtcacgaccgaaaaagacgattctgataaggatagaacatcagcaatt
ctacacgagctacgtggatcatgtgacgttgtttcatcagtaggaccttatttcttctcacattttccagaggctccaat
attggatcacacgatctccttgatccctgaggatttcattaaagacatctctctattcgtgaaggcgggtaaattcgcgg
gcaacaagcgtgtttacatccgatctctggtagacgccattggattcaagatcatcatggaaagaatgatgtgtccaggg
tcacaggacctcgacgtcacgtatcgcatcatccttttcctagctttatttcagagaattaaaattgaaaagcggcgttt
tcaattgatcctgtga

Protein
Protein IDpfu_aug1.0_1473.1_65986.t1
Definition-
>pfu_aug1.0_1473.1_65986.t1
VSAEWPRDLSTSNQDVLDELEREVEYREAPAEEDTTEDGDTVATDIPPEDTTDETNPTTPTYIPPPDETTAAPTDIPPPE
ETTAAPTDIPPPDETTVKPTDIPPPVETTAAPTDIPPPDETTAAPTDIPPPDETTAAPTVPPPIETTAKPTDIPPPDETT
AAPTDVPPPDVTTEKDDSDKDRTSAILHELRGSCDVVSSVGPYFFSHFPEAPILDHTISLIPEDFIKDISLFVKAGKFAG
NKRVYIRSLVDAIGFKIIMERMMCPGSQDLDVTYRIILFLALFQRIKIEKRRFQLIL

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