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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_147356.1_13932
Locus scaffold147356.1 : 1 ... 916 : +
To GenomeBrowser scaffold147356.1:1..916
Genes list of scaffold scaffold147356.1
Synonym pfu_aug2.0_1777.1_25143

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_147356.1_13932.t1 1 1 Gal_Lectin 50 127 1.0e-21 77.0 1.8e-25 1.3e-21 76.6

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_147356.1_13932.t1 gi|291231553|ref|XP_002735730.1| 3.0e-12

Transcript
Transcript IDpfu_aug1.0_147356.1_13932.t1
Definition-
>pfu_aug1.0_147356.1_13932.t1
gaatgcactaacagtacatgaaaattattttaaaaatcttaatgcattagaggcccgcatcaacattgacccgaccaaga
tgatagacgggcttggtcttatcaagatgtcttcttcttatagcaacagttcagtcacaaggaatacggactcccgagtt
cacattgagaaagccaactatggtaggataggtccgtcaagtgataatccgtgtggaagacccgaggactctaatcagaa
ttgtcgtgatcaagattctctttccatagtcaggaatcaatgtgaaggtcaacagacatgttcggtcgctgtgaactcgg
gaacttttggtggagacccctgcccaggcacatccaagtacttacaagtggaatatatttgctcgcgtaagcgttataac
atttactga

Protein
Protein IDpfu_aug1.0_147356.1_13932.t1
Definition-
>pfu_aug1.0_147356.1_13932.t1
NALTVHENYFKNLNALEARINIDPTKMIDGLGLIKMSSSYSNSSVTRNTDSRVHIEKANYGRIGPSSDNPCGRPEDSNQN
CRDQDSLSIVRNQCEGQQTCSVAVNSGTFGGDPCPGTSKYLQVEYICSRKRYNIY

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