Gene
| Gene Model ID | pfu_aug1.0_14748.1_03549 |
|---|---|
| Locus | scaffold14748.1 : 5036 ... 26150 : + |
| To GenomeBrowser | scaffold14748.1:5036..26150 |
| Genes list of scaffold | scaffold14748.1 |
| Synonym | pfu_aug2.0_27.1_23273 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_14748.1_03549.t1 | 3 | 1 | DUF1981 | 16 | 62 | 1.5e-07 | 30.8 | 0.061 | 230.0 | 1.4 |
| pfu_aug1.0_14748.1_03549.t1 | 2 | 1 | Sec7_N | 111 | 247 | 1.5e-36 | 125.3 | 4.1e-40 | 1.5e-36 | 125.3 |
| pfu_aug1.0_14748.1_03549.t1 | 3 | 2 | DUF1981 | 199 | 214 | 1.5e-07 | 30.8 | 0.51 | 1900.0 | -1.6 |
| pfu_aug1.0_14748.1_03549.t1 | 2 | 2 | Sec7_N | 358 | 377 | 1.5e-36 | 125.3 | 0.77 | 2900.0 | -2.5 |
| pfu_aug1.0_14748.1_03549.t1 | 3 | 3 | DUF1981 | 431 | 459 | 1.5e-07 | 30.8 | 4.1e-11 | 1.5e-07 | 30.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_14748.1_03549.t1 | gi|115695379|ref|XP_001199671.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_14748.1_03549.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_14748.1_03549.t1 atgccaaaggcagcagggtttgtggaagccgacaagtacttcctgccctttgaacttgcttgcaagtcaaagtgtccacg tattgtaaatacagcccttgattgtctacaggcattactaactgtggtgacttccaacacctgtgagatccacgagggaa ctgttttacagaccgtccgtacttgttacaatatttacctcgcaagtaaaaatttggtgaatcaaactacagcaaaggca acactcacacagatgcttaatgtgatatttacaagaatggaagcacaagccgctcaagaaataaagacacgggagaggac agccagtaaaacatcaaggaaaactgacgatgatagtgaaacctcagagctggaccagaataaagatggagtggagaatg gcactgatgacagagaaaagacgaatgagatgtttatcaatgctataaagcagtatctatgtgtagcattgtccaagaac ggtgtcagctctgtaccggaggtgtttgagttatcactggccatatttctgacgcttttgtcaaacttcaaacaacatct gaaaatgcaaattgaggtgtttttcaaagagatattcctatacatattagaaaccccgagcagctcttttgaacataaat ggatggtcattcaggctcttactaggatttgtgcagatgcccaatgtgtagtagatatttacctcaactatgattgtgat ctggctttagctaacatatttgaaagactggtcaatgatttgtcaaaaatagcccagggtcgacaggctctagctatagg tgctacccctcttcaagagaagagcatacgtataaagggcttggaatgcctagtgtcactgttaaagtgtatggtagaat ggagtaaagatttatatgtcaatccacattcacagtcaaatctaggtcaagagagtaagccttacacagagactgacagt gactcagggaagggtacaatgacgagttatggcagctctaattccctgaactcgaatgcgagctctcagactaccgctag tctccctcaggataaccccgaacagttcgaaaatctgaaacagcaaaaagaaatcatggaaactggaatagaaatgttta acaagaagcccaaaaagggtctggcgtaccttcaggagcaaggcatgctgggaaatatgccagatgatgtggcagagttc ttccatacagatgataggctagacaaggttggatgtaatcctcatgaggatatagcgttctttgctgtagactccctaag acagctgtccattaaattcctggaaaaaggagaatttgctaattttaaattccagaaagattttctccgaccgtttgaac atatcatgaaaagaaacag |
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Protein
| Protein ID | pfu_aug1.0_14748.1_03549.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_14748.1_03549.t1 MPKAAGFVEADKYFLPFELACKSKCPRIVNTALDCLQALLTVVTSNTCEIHEGTVLQTVRTCYNIYLASKNLVNQTTAKA TLTQMLNVIFTRMEAQAAQEIKTRERTASKTSRKTDDDSETSELDQNKDGVENGTDDREKTNEMFINAIKQYLCVALSKN GVSSVPEVFELSLAIFLTLLSNFKQHLKMQIEVFFKEIFLYILETPSSSFEHKWMVIQALTRICADAQCVVDIYLNYDCD LALANIFERLVNDLSKIAQGRQALAIGATPLQEKSIRIKGLECLVSLLKCMVEWSKDLYVNPHSQSNLGQESKPYTETDS DSGKGTMTSYGSSNSLNSNASSQTTASLPQDNPEQFENLKQQKEIMETGIEMFNKKPKKGLAYLQEQGMLGNMPDDVAEF FHTDDRLDKVGCNPHEDIAFFAVDSLRQLSIKFLEKGEFANFKFQKDFLRPFEHIMKRN |
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