Gene
| Gene Model ID | pfu_aug1.0_1478.1_37028 |
|---|---|
| Locus | scaffold1478.1 : 1846 ... 23188 : + |
| To GenomeBrowser | scaffold1478.1:1846..23188 |
| Genes list of scaffold | scaffold1478.1 |
| Synonym | pfu_aug2.0_925.1_17942 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1478.1_37028.t1 | 1 | 1 | EF-hand_7 | 149 | 219 | 1.5e-06 | 28.2 | 1.1e-09 | 2.0e-06 | 27.8 |
| pfu_aug1.0_1478.1_37028.t1 | 1 | 1 | EF-hand_8 | 172 | 220 | 1.8e-08 | 33.8 | 3.3e-11 | 6.1e-08 | 32.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1478.1_37028.t1 | gi|260817501|ref|XP_002603625.1| | hypothetical protein BRAFLDRAFT_126931 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_1478.1_37028.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1478.1_37028.t1 atggctaacgacacaaatgcagtaaaacttgaaacttctctgccgatatacagaggattagcgtctcagccgacggcgga gggcgagaggagatcctcttttccattcctacctacctttgatcaccaggaggaggaagtcgagggcagggggctgaaat ctgcccccgaatttgtcaggtcaagtgacgaatcttcgatagatggcgttgaatctgaggacaatacttctgaagatgac cttgagaataattcagtgaggtcaaggtcgtttgcaatatacagaaagatcaagaaagaatttgagcggcgaaggagatc ttttcgagatggtgattctgatgacgaaggaaactttggtgacaaagataaaacccttcgtctcgaggagcagatcaagc ttgaccatctaaaacagctgatggacgagttcctgaaccataagcccccggacatcgtcaaacaggcggggtcagcctac ttccctgccaagacagagaaacgcacccccggggccatgaacatggaggagttcaaatcaacggtggccaaagttctcaa gacagaggagtatgatgaatatttagaaaagttgttcaacaagttggacacttctctggatggatatgtggattggaatg aattttgtacctatatgttattactgtacagagaaaatgactacatgaggaccaaaagggaaatccccttcttgtctgaa ccaaaaataagacatattgaccatacaaagcaagaacaaacaacgaaaatagttgccaccgcaaatccactacgctatgt cacagttagtaaggacatagagaaagggaatcatgagagctacgtcacccacgagaagatcctacacggagaaatgtggt tttcctcgttaccagacatagtaaagcaagtcatgtatctacccgagaatgagtacattatatcatcaactagcagcccc aaacaatcattagtcatctccccttgtgataaaaaggacttcaagaagtcatatatatttgatatagaaaaggttgtcaa agtatgggacattaaggagcacacctgtctacaaacaatcgtattaaagtttccgagcagtattcacggcagaatgccgg agcatggtcagtttccgatgcatctccaaccctctccccacgatactcttctagtcacttgtaacgatcatgttggcatg ctcaaactaggtcatacgtcacaaccaaagatgctggaggccgtaacgcacgatactcaactttgtagtgccatctacaa caaattatttaatcaagtatggaatttccaaaatggacataatctacataagttagagccggtatcggaagcagaaatta caggaatattgccgtactttgatcgtaagatgattctggcggtcggatggggcagaaaactcatcagatacgatgactct gatcctgataacatgtacataccagctcaattagattggaaaggtggacagatccatcaggatgacatcttggccatgga ctttgccttgccaaactatcttgccacagctgggtttgatggggagatagtggtctgggatatagagacggagaaaatct ttattagactacgcaaaggacaacaggctgatatgtaa |
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Protein
| Protein ID | pfu_aug1.0_1478.1_37028.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1478.1_37028.t1 MANDTNAVKLETSLPIYRGLASQPTAEGERRSSFPFLPTFDHQEEEVEGRGLKSAPEFVRSSDESSIDGVESEDNTSEDD LENNSVRSRSFAIYRKIKKEFERRRRSFRDGDSDDEGNFGDKDKTLRLEEQIKLDHLKQLMDEFLNHKPPDIVKQAGSAY FPAKTEKRTPGAMNMEEFKSTVAKVLKTEEYDEYLEKLFNKLDTSLDGYVDWNEFCTYMLLLYRENDYMRTKREIPFLSE PKIRHIDHTKQEQTTKIVATANPLRYVTVSKDIEKGNHESYVTHEKILHGEMWFSSLPDIVKQVMYLPENEYIISSTSSP KQSLVISPCDKKDFKKSYIFDIEKVVKVWDIKEHTCLQTIVLKFPSSIHGRMPEHGQFPMHLQPSPHDTLLVTCNDHVGM LKLGHTSQPKMLEAVTHDTQLCSAIYNKLFNQVWNFQNGHNLHKLEPVSEAEITGILPYFDRKMILAVGWGRKLIRYDDS DPDNMYIPAQLDWKGGQIHQDDILAMDFALPNYLATAGFDGEIVVWDIETEKIFIRLRKGQQADM |
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