Gene
| Gene Model ID | pfu_aug1.0_148.1_57989 |
|---|---|
| Locus | scaffold148.1 : 50496 ... 52292 : + |
| To GenomeBrowser | scaffold148.1:50496..52292 |
| Genes list of scaffold | scaffold148.1 |
| Synonym | pfu_aug2.0_11.1_03405 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_148.1_57989.t1 | 1 | 1 | Kdo | 19 | 121 | 7.9e-06 | 25.0 | 5.8e-09 | 9.6e-06 | 24.7 |
| pfu_aug1.0_148.1_57989.t1 | 1 | 1 | Pkinase | 24 | 100 | 1.3e-08 | 34.3 | 9.9e-12 | 1.6e-08 | 34.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_148.1_57989.t1 | gi|291230744|ref|XP_002735324.1| | PREDICTED: TP53-regulating kinase-like [Saccoglossus kowalevskii] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| trochophore | 1 |
| >Adult tissues | |
| maleGonad | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_148.1_57989.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_148.1_57989.t1 atgaatggagtgaggacgccaactgtttactttgtcgacctggagacgtcgcagatttacatggaggagataacagattc tgtaaccgtcagagattatatcatgtccgttcaaaaatctcagagcttagaagactcaattgtgcagctgaaaccattag gaaggaaaataggagagacactagcagtacttcaccagaataacatagtgcatggagatcttacaacgtcaaatatgtta ttacaaagtgatcctatgaacctgaatcttgttatgatagactttggactcagccattttgagaaccttgcggaggataa gggtgtagatttatatgtattagaaagggcaatactgagtacccatcctaactcagatgagttcttcagtgaaatattag actcttatacacgaagcaacccaggatctgcagatgtcatagctaaacttgatgaagtgaggatgagagggcgaaagaga acaatggtcggatga |
|
Protein
| Protein ID | pfu_aug1.0_148.1_57989.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_148.1_57989.t1 MNGVRTPTVYFVDLETSQIYMEEITDSVTVRDYIMSVQKSQSLEDSIVQLKPLGRKIGETLAVLHQNNIVHGDLTTSNML LQSDPMNLNLVMIDFGLSHFENLAEDKGVDLYVLERAILSTHPNSDEFFSEILDSYTRSNPGSADVIAKLDEVRMRGRKR TMVG |
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