Gene
| Gene Model ID | pfu_aug1.0_14844.1_46808 |
|---|---|
| Locus | scaffold14844.1 : 3083 ... 15146 : - |
| To GenomeBrowser | scaffold14844.1:3083..15146 |
| Genes list of scaffold | scaffold14844.1 |
| Synonym | pfu_aug2.0_125.1_16973 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_14844.1_46808.t1 | 1 | 1 | SBP_bac_3 | 63 | 170 | 1.7e-14 | 53.6 | 4.0e-18 | 2.9e-14 | 52.8 |
| pfu_aug1.0_14844.1_46808.t1 | 1 | 1 | Lig_chan-Glu_bd | 76 | 122 | 1.5e-12 | 47.2 | 3.7e-16 | 2.7e-12 | 46.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_14844.1_46808.t1 | gi|341877019|gb|EGT32954.1| | CBN-GLR-3 protein [Caenorhabditis brenneri] | 7.0e-20 |
Transcript
| Transcript ID | pfu_aug1.0_14844.1_46808.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_14844.1_46808.t1 gtcattgagcaatattccacaccatgtacatggtatcaaattcggactttaatgtggattccacattcaaaaagagctct cagcaacgtgggacgaataaggttatcaggggaaatacagcttcatagtcacatctttcctaatactgagttcgggttca atggtcgacagtttattgtatcaacattaccgtgggcaccattcgtgacaaaagtcaatggaaatattacagatggaatt tgtatcgatattcttcgacaactctcacagtccctcaacttcacatacaaaataatagagcctgctgatggagaatgggg tcagatgttaccaaacaagtcgtttaccggtctcattggacagctagaacggcatgagattgacctcctagcggcacctc tttccataacgttacccagggaggcggtcgtagatttcatctaccctttcttcaatgaagtaacaaagatcatacaaaag aaacctaacgagaacgacacaaaatggaggaagttgattgatcctttccatccttacgttctcctgggtttggctgtctg cctgccgtttgcgtctttcttaatgtctttgtatgagagtgtgttcccccagtacagagacactccggaacgccatgaag atgacggtttacatatcttctctaacgcattttggtacatgtatggagcactcctaacccaaggttggtag |
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Protein
| Protein ID | pfu_aug1.0_14844.1_46808.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_14844.1_46808.t1 VIEQYSTPCTWYQIRTLMWIPHSKRALSNVGRIRLSGEIQLHSHIFPNTEFGFNGRQFIVSTLPWAPFVTKVNGNITDGI CIDILRQLSQSLNFTYKIIEPADGEWGQMLPNKSFTGLIGQLERHEIDLLAAPLSITLPREAVVDFIYPFFNEVTKIIQK KPNENDTKWRKLIDPFHPYVLLGLAVCLPFASFLMSLYESVFPQYRDTPERHEDDGLHIFSNAFWYMYGALLTQGW |
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