Gene
| Gene Model ID | pfu_aug1.0_1485.1_07973 |
|---|---|
| Locus | scaffold1485.1 : 55766 ... 69927 : + |
| To GenomeBrowser | scaffold1485.1:55766..69927 |
| Genes list of scaffold | scaffold1485.1 |
| Synonym | pfu_aug2.0_7650.1_02925 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1485.1_07973.t1 | 3 | 1 | DNMT1-RFD | 111 | 245 | 2.9e-37 | 127.5 | 1.10001e-40 | 8.1e-37 | 126.1 |
| pfu_aug1.0_1485.1_07973.t1 | 3 | 1 | BAH | 355 | 394 | 2.6e-20 | 72.3 | 0.16 | 1200.0 | -0.8 |
| pfu_aug1.0_1485.1_07973.t1 | 3 | 2 | BAH | 415 | 436 | 2.6e-20 | 72.3 | 0.029 | 220.0 | 1.6 |
| pfu_aug1.0_1485.1_07973.t1 | 3 | 2 | DNMT1-RFD | 422 | 433 | 2.9e-37 | 127.5 | 0.27 | 2000.0 | -1.7 |
| pfu_aug1.0_1485.1_07973.t1 | 3 | 3 | BAH | 493 | 658 | 2.6e-20 | 72.3 | 9.6e-24 | 7.1e-20 | 70.9 |
| pfu_aug1.0_1485.1_07973.t1 | 3 | 3 | DNMT1-RFD | 688 | 702 | 2.9e-37 | 127.5 | 0.65 | 4800.0 | -2.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1485.1_07973.t1 | gi|115972577|ref|XP_001178888.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1485.1_07973.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1485.1_07973.t1 atgttcctcagaacccctggaaaaagaaagtcaacagccgatgccgaaaaagaagttaaaaatgaggaggagaaagacca gaaaaagccgaaaatagacggagaagaacagtcggaaaactccaacaaggatgaaagtacaacaaccactagtacagatg aggcacctgttaaagtgttacccacaaaatgtcgtgaatgtaaacagctcctgaatgaccctgaccttcgtatttaccca ggagatcccgatgaaagcctagaggagttcatagcattgacagatcccaagttgtccgtatttacaggagaggaagatga aatcaacacttatgacgagagacctcagcacaaaattactaatttcagtatatacgataagaacacccacttatgtccgt ttgatacggggctgatagagaaaaacgtcctgttatacttcagtggaacaatcaagcccatctatgatgaaaaccccagt cctgaaggaggaataccagcaaccaagatgggaccaatcaatgaatggtggacggcgggctttgatggcggagaaaacgc tcttatcgggttcagcacagcatacgcggagtatatactgatgtcaccgagcgagatttatcagccttacatggacacga tgaaggagaagatccatatgagtaaagttgttattgagttcttacagaataaccaggaagctacttacgaagacctgctc aacaaaatacagactacagtaccacctgcaggattgaccagtcttactgaggactccttactcaggcattcacagttcat tgtcgaccaggtacagagctatgacgaggcagcagctgatgacgagaatcttctaattacgacaccatgtatgagagctc tgatcaaactggctggtgttacactggggaaaaggcgtcagttgaggagggagttgcataagagagataaagtcaagaag ccggcctttaccatggccacagtgacacccctcgtacagcagatatttgacagtatatttgccggggagatagacgacaa gaaaggccaggggggtaggaggaggaggtgtggcatttgtgagacaaaacttaaatgggatggtgagccgtttaaagtgg atggaaagaattcatattacaagtctgtatttgtaaacaatgaaaaggtggtgttcaagaagccggccgatgattggttc atgcttggtggaatagaacacccggagacggacagtgtggtggaagacggcaaaagttactactaccagaaatggtatga tccagtgttagccagatttgaagacccgccaacgataaatgaagaggagattgaaaacaaatttaagttctgccttgtat gtcgtcgcttagaggagctgcggaagaaagaaaatccagcagttggtgagaaattagaggatcagaaaacagagagtaaa actttctacggaagcgtggctcgggacggcataaattacaaagtaggagattgttgttatatagaacctgacgcatttgg attcaacgtacagcacgtccaaacaaagaaacctaaacaggagaagaaaaagattgacgatgagctctaccctgaggcat acagaaaaagtgactatgtgaaaggatctaatgaagatgttcctgaaccattcagaatcggacgtattcaggaaatattc tgcaaaaaatcagattctaaattactttatcccacagaagtaaaattaaaggtttcaaagttctacaggccagagaacac ccacaaaggtatgggggcatcacatcatgcagattttaatcaactttactggtccgatgaagaggccacgatacatttca accgtgtctgtggtaaatgctcagtagtgtacagtgagaatattaaagacctaacagaatactccaccaaatgtcctgat aacttctacttcactgaggcttatgacagcgaaacaaaggagtttgaggaacctccgagtacagctagacagatgggtag atttactgatgtgaattctatggaaacttatttacacaacttacacttgtccaaggaagcaagacctagactttgctata agaatttctttactgaagtttttacatcaaatattagaaatggcaaataa |
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Protein
| Protein ID | pfu_aug1.0_1485.1_07973.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1485.1_07973.t1 MFLRTPGKRKSTADAEKEVKNEEEKDQKKPKIDGEEQSENSNKDESTTTTSTDEAPVKVLPTKCRECKQLLNDPDLRIYP GDPDESLEEFIALTDPKLSVFTGEEDEINTYDERPQHKITNFSIYDKNTHLCPFDTGLIEKNVLLYFSGTIKPIYDENPS PEGGIPATKMGPINEWWTAGFDGGENALIGFSTAYAEYILMSPSEIYQPYMDTMKEKIHMSKVVIEFLQNNQEATYEDLL NKIQTTVPPAGLTSLTEDSLLRHSQFIVDQVQSYDEAAADDENLLITTPCMRALIKLAGVTLGKRRQLRRELHKRDKVKK PAFTMATVTPLVQQIFDSIFAGEIDDKKGQGGRRRRCGICETKLKWDGEPFKVDGKNSYYKSVFVNNEKVVFKKPADDWF MLGGIEHPETDSVVEDGKSYYYQKWYDPVLARFEDPPTINEEEIENKFKFCLVCRRLEELRKKENPAVGEKLEDQKTESK TFYGSVARDGINYKVGDCCYIEPDAFGFNVQHVQTKKPKQEKKKIDDELYPEAYRKSDYVKGSNEDVPEPFRIGRIQEIF CKKSDSKLLYPTEVKLKVSKFYRPENTHKGMGASHHADFNQLYWSDEEATIHFNRVCGKCSVVYSENIKDLTEYSTKCPD NFYFTEAYDSETKEFEEPPSTARQMGRFTDVNSMETYLHNLHLSKEARPRLCYKNFFTEVFTSNIRNGK |
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