Gene
| Gene Model ID | pfu_aug1.0_1485.1_07975 |
|---|---|
| Locus | scaffold1485.1 : 78106 ... 89325 : - |
| To GenomeBrowser | scaffold1485.1:78106..89325 |
| Genes list of scaffold | scaffold1485.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1485.1_07975.t2 | 2 | 1 | zf-B_box | 16 | 58 | 1.4e-14 | 53.6 | 4.1e-08 | 0.00012 | 21.8 |
| pfu_aug1.0_1485.1_07975.t2 | 2 | 2 | zf-B_box | 75 | 112 | 1.4e-14 | 53.6 | 5.7e-13 | 1.7e-09 | 37.4 |
Transcript
| Transcript ID | pfu_aug1.0_1485.1_07975.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1485.1_07975.t1 atgttaagaagatctttcaaaagagatccatataagataagacatcatcaaagctatgattgcagagagcagctagctga acaaatgcgaacacaatacgacgacaacgacgacaacaacgcctcgggtatggcattagctctccggactttttcgtccc ggcgagctaaaaatcagaacggacacgttgcacgcgctgtatttgcgatcttgcgtattaatgaaagtcaatccaaaagt cagaatccaatcatcgaaatccatggccattaa |
|
| Transcript ID | pfu_aug1.0_1485.1_07975.t2 |
| Definition | - |
>pfu_aug1.0_1485.1_07975.t2 atgagtgacaacggaacctcggtgattccaccccagacatttgtggagtgtggccaatgtaaagcacacgtcaacatatc atggttttgtaaaaactgtccttgctcactttgtgacacatgtgctaccgcccacaagacaatccatcaatacaaatccc atacagtcgttccacgaacatacagcgttctccgattgtacggtccggcaaaattagcagaacagtgtcacatccatcca gaaaaagaaatatcatcctactgcaatgattgcggcattccatgctgtgtcacgtgtatggtgaacgatcataaacgtca cgacttctctaccatagaagacaagtacctggatgcagaaagaggcctgaatgagtactacagacagctggacaccgaca tcagaccaacgcttgaaaagatggaggaacaagctagatcggaagatgacagccatgttgaggaagtcatagataacatt aatatttttcgcaaagatgttgttcaaaattttcatagagcatgtgatgatctcattgttcaggttcgttcgttttcaag caaaacaaatgaagggttgaaagaaattgaaacctcactgcaaaatcttgaacacataaagaaagaaattgaagaaaaaa tagcaaggggaaatttagacctaattaaatatacacctcccaaaatggatacacttgttcccaaatttaaaggtccatca agggttgtcccaatttttgtaccttctagaactctgtttgatttgattaaaaagcctgttggaattattcagtccaaaga gatcaagaaagatgaaattaagagcagaaacataataaatatcaggtccaaatatgaaagaaattttgatgaaatgttaa gaagatctttcaaaagagatccatataagataagacatcatcaaagctatgattgcagagagcagctagctgaacaaatg cgaacacaatacgacgacaacgacgacaacaacgcctcgggtatggcattagctctccggactttttcgtcccggcgagc taaaaatcagaacggacacgttgcacgcgctgtatttgcgatcttgcgtattaatgaaagtcaatccaaaagtcagaatc caatcatcgaaatccatggccattaa |
|
Protein
| Protein ID | pfu_aug1.0_1485.1_07975.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1485.1_07975.t1 MLRRSFKRDPYKIRHHQSYDCREQLAEQMRTQYDDNDDNNASGMALALRTFSSRRAKNQNGHVARAVFAILRINESQSKS QNPIIEIHGH |
|
| Protein ID | pfu_aug1.0_1485.1_07975.t2 |
| Definition | - |
>pfu_aug1.0_1485.1_07975.t2 MSDNGTSVIPPQTFVECGQCKAHVNISWFCKNCPCSLCDTCATAHKTIHQYKSHTVVPRTYSVLRLYGPAKLAEQCHIHP EKEISSYCNDCGIPCCVTCMVNDHKRHDFSTIEDKYLDAERGLNEYYRQLDTDIRPTLEKMEEQARSEDDSHVEEVIDNI NIFRKDVVQNFHRACDDLIVQVRSFSSKTNEGLKEIETSLQNLEHIKKEIEEKIARGNLDLIKYTPPKMDTLVPKFKGPS RVVPIFVPSRTLFDLIKKPVGIIQSKEIKKDEIKSRNIINIRSKYERNFDEMLRRSFKRDPYKIRHHQSYDCREQLAEQM RTQYDDNDDNNASGMALALRTFSSRRAKNQNGHVARAVFAILRINESQSKSQNPIIEIHGH |
|