Gene
| Gene Model ID | pfu_aug1.0_149.1_65261 |
|---|---|
| Locus | scaffold149.1 : 524 ... 4545 : - |
| To GenomeBrowser | scaffold149.1:524..4545 |
| Genes list of scaffold | scaffold149.1 |
| Synonym | NA |
Manual annotation
| Study field | signal molecules |
|---|---|
| Gene name | MAPK |
| Description | BLAST best hit to mitogen-activated protein kinase 6 [Bos taurus] |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_149.1_65261.t1 | 1 | 1 | Pkinase | 27 | 190 | 1.5e-38 | 132.4 | 6.19934e-42 | 1.8e-38 | 132.1 |
| pfu_aug1.0_149.1_65261.t1 | 1 | 1 | Pkinase_Tyr | 31 | 194 | 5.6e-21 | 74.7 | 2.8e-24 | 8.4e-21 | 74.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_149.1_65261.t1 | gi|47230638|emb|CAF99831.1| | unnamed protein product, partial [Tetraodon nigroviridis] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_149.1_65261.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_149.1_65261.t1 atggcagataattttccctcctcccctagccaacttgaaatcttggagggaacttttaacattgattccagatttagtaa tctacgtccattgtgctttggaggaaatggtattgtcttctcagctctggacaaagaatgtgagaaaactgtcgccataa agaaaatctcattctccgacaaaaagacctgcaagtatgccttgagagaaatcaaaataattcgccgattgagacatgat aacattgtaaccgtttatgacatcttaggaccggatgggagaggtttaagtgcgaggacttctgttagcttaagtgaatt aacgtccctttacatggtacaggagttactggatatagatctcctacagttaatacagagtcagcttctcacggcggacc atgctcaacttttcctttaccagatgttacggggcttgaagtacatacactctgctaatatagttcacagagaccttaaa cctgctaacctgctcatcaatgtagaagacctggtgctgaaaataggagactttgggctggccagggtaatagactctga atattcacacaaggtgagctgtagtattcataagaatgtgtacatgtacaaggctgaagtgtcgacatttctagctcacc tcgaggaagtttaa |
|
Protein
| Protein ID | pfu_aug1.0_149.1_65261.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_149.1_65261.t1 MADNFPSSPSQLEILEGTFNIDSRFSNLRPLCFGGNGIVFSALDKECEKTVAIKKISFSDKKTCKYALREIKIIRRLRHD NIVTVYDILGPDGRGLSARTSVSLSELTSLYMVQELLDIDLLQLIQSQLLTADHAQLFLYQMLRGLKYIHSANIVHRDLK PANLLINVEDLVLKIGDFGLARVIDSEYSHKVSCSIHKNVYMYKAEVSTFLAHLEEV |
|