Gene
Gene Model ID | pfu_aug1.0_149.1_65266 |
---|---|
Locus | scaffold149.1 : 76526 ... 87359 : + |
To GenomeBrowser | scaffold149.1:76526..87359 |
Genes list of scaffold | scaffold149.1 |
Synonym | pfu_aug2.0_422.1_07496 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_149.1_65266.t1 | 1 | 1 | GalP_UDP_transf | 2 | 121 | 6.3e-36 | 124.1 | 2.6e-39 | 1.3e-35 | 123.1 |
pfu_aug1.0_149.1_65266.t1 | 1 | 1 | GalP_UDP_tr_C | 135 | 300 | 0.0 | 201.4 | 0.0 | 0.0 | 201.0 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_149.1_65266.t1 | gi|229366364|gb|ACQ58162.1| | Galactose-1-phosphate uridylyltransferase [Anoplopoma fimbria] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
>Adult tissues | |
maleGonad | 1 |
Transcript
Transcript ID | pfu_aug1.0_149.1_65266.t1 |
---|---|
Definition | - |
>pfu_aug1.0_149.1_65266.t1 atgaagagaccctggcagggacaggtggagaaacctcaggaagatgacatacccagacacgacccaaagaatcccttatg tcctggaaatacaaggcctaatggcaaggtgaatccagactatgatagtacgtttgtgtttgataatgactttcctgctt tactagatgatataccttctccagagcctagcgattctccactattcaaaactgctgctgcttgcggtacgtgtaaagtt atgtgtttccatcccaggtccgacgtcacattacctctgatgtcacctcaggaagtgagggccgtaatagacaaatggac ggaaataaatacagaccttggcaaaaagtacaactgggtatgggcaagttcttatttaccaaatgatcctgcgatcaaac acagaacacagagagagtattatatgaaacacaaatcaccgatgctggtggactatgttaaacaagaactgaacaaaaag gagaggattataatagaaaatgacagttgggtgtggttagtaccgtactgggccgtatggccatatgagaccatgctgct tcctaaacgtcatgttcagagattagaagatttaaccgattcggaacggaacgatcttgcagccatcatgatcaaattgt tgacaaagtatgacaacctgtttgacatctcttttccatattctatgggatggcatggtgctcctactggggagtatatg gatgaagataacagccactggcagcttcatgctctgtactacccccctctgctgagatcagccaccgttaagaagttcat ggtaggatacgagatgttatctcagccccagagggaccttactgcagaacaggcagcagacaaactgaggggtttacccg atactcattataaacataggacatcttaa |
Protein
Protein ID | pfu_aug1.0_149.1_65266.t1 |
---|---|
Definition | - |
>pfu_aug1.0_149.1_65266.t1 MKRPWQGQVEKPQEDDIPRHDPKNPLCPGNTRPNGKVNPDYDSTFVFDNDFPALLDDIPSPEPSDSPLFKTAAACGTCKV MCFHPRSDVTLPLMSPQEVRAVIDKWTEINTDLGKKYNWVWASSYLPNDPAIKHRTQREYYMKHKSPMLVDYVKQELNKK ERIIIENDSWVWLVPYWAVWPYETMLLPKRHVQRLEDLTDSERNDLAAIMIKLLTKYDNLFDISFPYSMGWHGAPTGEYM DEDNSHWQLHALYYPPLLRSATVKKFMVGYEMLSQPQRDLTAEQAADKLRGLPDTHYKHRTS |