Gene
| Gene Model ID | pfu_aug1.0_149.1_65267 |
|---|---|
| Locus | scaffold149.1 : 90581 ... 99615 : - |
| To GenomeBrowser | scaffold149.1:90581..99615 |
| Genes list of scaffold | scaffold149.1 |
| Synonym | pfu_aug2.0_422.1_07495 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_149.1_65267.t1 | 1 | 1 | Peptidase_C14 | 23 | 303 | 6.3e-17 | 62.0 | 1.2e-20 | 1.8e-16 | 60.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_149.1_65267.t1 | gi|325516447|gb|ADZ24782.1| | caspase 3/7-3 [Mytilus galloprovincialis] | 6.0e-21 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_149.1_65267.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_149.1_65267.t1 atgaatgcaatggatgctttgaagcagacggaaaatgaggatgaatttaccctgaaaataaggaagggtgtggcagtaat tattgcaaatgaacgtttccaagatggtagtcagtatagacctggagctaaaaaagacttgacagaaatgtacgatctat ttcacaacaagctacgctatacaacctattggattaaagatgcatcatcatattcgttgaaaaactttctaacaatggtg acaaatcagaaagaggttttaaaggcagcagagtgtttgactgtggtgataagttctcatgggagccagaatcctgttgt tacaaatcagctggagaaactatttcctgaaaacttccgagtttacgaacactttgtgacaacgtatgatggagaaatga gaaccatggacatcatggaagcctttgatgaaaaccactgtaaggaactgaaaaataaacccaaattcttctttatgcag acatgtagctctcgacaagggaaaactctacatgaggctttagacacgggagtagatgtagagatagagataaagaaacc caaaatagagccagccaagttctttgctccaccccagtcaacaatggatcaagatgaatcttggcagtctagcatggatg ttaaaggtgctaagcctcctacatttgtgattggtgggaagaactatgttgacatcacaggcagaacgattctattggag gaagaaataaatgtagctcctcccccatgctaccataactgtatggttgtcatggcaagcccttcagagcgtgtggcatg gtctgacaatgataagggtggatggcttctatactgtatgtaccaggtcctgagtaactacattagaaatggtcatacca tcaacctacagcaggccattaccgaggttagtcacatgatggccctcagtatggagtctaacaccgcggaggaagaattt aacctgatgaagtgtgtgccggcagttacacatatgctgatacaagacattattctcgtccctcccggggttttagcttg a |
|
Protein
| Protein ID | pfu_aug1.0_149.1_65267.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_149.1_65267.t1 MNAMDALKQTENEDEFTLKIRKGVAVIIANERFQDGSQYRPGAKKDLTEMYDLFHNKLRYTTYWIKDASSYSLKNFLTMV TNQKEVLKAAECLTVVISSHGSQNPVVTNQLEKLFPENFRVYEHFVTTYDGEMRTMDIMEAFDENHCKELKNKPKFFFMQ TCSSRQGKTLHEALDTGVDVEIEIKKPKIEPAKFFAPPQSTMDQDESWQSSMDVKGAKPPTFVIGGKNYVDITGRTILLE EEINVAPPPCYHNCMVVMASPSERVAWSDNDKGGWLLYCMYQVLSNYIRNGHTINLQQAITEVSHMMALSMESNTAEEEF NLMKCVPAVTHMLIQDIILVPPGVLA |
|