Gene
Gene Model ID | pfu_aug1.0_149.1_65267 |
---|---|
Locus | scaffold149.1 : 90581 ... 99615 : - |
To GenomeBrowser | scaffold149.1:90581..99615 |
Genes list of scaffold | scaffold149.1 |
Synonym | pfu_aug2.0_422.1_07495 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_149.1_65267.t1 | 1 | 1 | Peptidase_C14 | 23 | 303 | 6.3e-17 | 62.0 | 1.2e-20 | 1.8e-16 | 60.5 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_149.1_65267.t1 | gi|325516447|gb|ADZ24782.1| | caspase 3/7-3 [Mytilus galloprovincialis] | 6.0e-21 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 2 |
>Adult tissues |
Transcript
Transcript ID | pfu_aug1.0_149.1_65267.t1 |
---|---|
Definition | - |
>pfu_aug1.0_149.1_65267.t1 atgaatgcaatggatgctttgaagcagacggaaaatgaggatgaatttaccctgaaaataaggaagggtgtggcagtaat tattgcaaatgaacgtttccaagatggtagtcagtatagacctggagctaaaaaagacttgacagaaatgtacgatctat ttcacaacaagctacgctatacaacctattggattaaagatgcatcatcatattcgttgaaaaactttctaacaatggtg acaaatcagaaagaggttttaaaggcagcagagtgtttgactgtggtgataagttctcatgggagccagaatcctgttgt tacaaatcagctggagaaactatttcctgaaaacttccgagtttacgaacactttgtgacaacgtatgatggagaaatga gaaccatggacatcatggaagcctttgatgaaaaccactgtaaggaactgaaaaataaacccaaattcttctttatgcag acatgtagctctcgacaagggaaaactctacatgaggctttagacacgggagtagatgtagagatagagataaagaaacc caaaatagagccagccaagttctttgctccaccccagtcaacaatggatcaagatgaatcttggcagtctagcatggatg ttaaaggtgctaagcctcctacatttgtgattggtgggaagaactatgttgacatcacaggcagaacgattctattggag gaagaaataaatgtagctcctcccccatgctaccataactgtatggttgtcatggcaagcccttcagagcgtgtggcatg gtctgacaatgataagggtggatggcttctatactgtatgtaccaggtcctgagtaactacattagaaatggtcatacca tcaacctacagcaggccattaccgaggttagtcacatgatggccctcagtatggagtctaacaccgcggaggaagaattt aacctgatgaagtgtgtgccggcagttacacatatgctgatacaagacattattctcgtccctcccggggttttagcttg a |
Protein
Protein ID | pfu_aug1.0_149.1_65267.t1 |
---|---|
Definition | - |
>pfu_aug1.0_149.1_65267.t1 MNAMDALKQTENEDEFTLKIRKGVAVIIANERFQDGSQYRPGAKKDLTEMYDLFHNKLRYTTYWIKDASSYSLKNFLTMV TNQKEVLKAAECLTVVISSHGSQNPVVTNQLEKLFPENFRVYEHFVTTYDGEMRTMDIMEAFDENHCKELKNKPKFFFMQ TCSSRQGKTLHEALDTGVDVEIEIKKPKIEPAKFFAPPQSTMDQDESWQSSMDVKGAKPPTFVIGGKNYVDITGRTILLE EEINVAPPPCYHNCMVVMASPSERVAWSDNDKGGWLLYCMYQVLSNYIRNGHTINLQQAITEVSHMMALSMESNTAEEEF NLMKCVPAVTHMLIQDIILVPPGVLA |