Gene
| Gene Model ID | pfu_aug1.0_149.1_65269 |
|---|---|
| Locus | scaffold149.1 : 120836 ... 156101 : + |
| To GenomeBrowser | scaffold149.1:120836..156101 |
| Genes list of scaffold | scaffold149.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_149.1_65269.t1 | 1 | 1 | zf-met | 877 | 899 | 3.9e-08 | 33.2 | 2.9e-11 | 1.4e-07 | 31.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_149.1_65269.t1 | gi|115944197|ref|XP_001187929.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_149.1_65269.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_149.1_65269.t1 atgcggtcagataacaacgagcataacagtcgaaactcgtctgcttcgcatcgtggtggtgcaagtcggaacaacaactc gcaagtgtctaatttcacaaaaccgtacaggaagcaagtactcaaggccctcttcgaaattggccactttcagccctcag attctggtataaagaagaaagactacacatctcataagaaatccaggtcagcatcagaatctgaccaaaacatgattaat aagaaccagcaggatgtgaccaagtcacctaagtcagacggaggatccagaaagccggacaggagagccagattctggaa gttcctctttgacaatctacagagagctgtagatgccatatatgagacatgtgaacaggatgaaagtgtggtagaatgta aagaggttataatgatgctagagcaaagtacaagagacttcaaatcactgatagaaaaacttcacatgctgagagcctat gaggaatcaacaaaggaaggtgacagacctccatctatagcgtgggaggtgaggaagatgtcacctggtaagtcagctgg taatagtcagggaacaagtcgtagctctcctagtccagcacaaagagtcctacaattcagtgaccaaaataaacaagaac caaaagctgtaagtgccactgtatgtggaaacagttgggcagacaaagtaagaggagcctctaccacatccccacagaaa gtgttatctcctacaaccattaaatctccaccacctgtcctgccctcccctcctcctaaacagaatgggcatgcctcaga tgcagatacagatggcagtactacaatagaagatgacaatgaaggatgggaaactgtacatagaggaggaaagggcaagg cccgtaactctccctctcagcgttctttagagaatttgtctggtgtgggaaaagttccagtaaaactgaaacgaacatta tctgatcctcacagtggaatgaacaaacggcctccgtggaatcatggagcaagcaggaggacaccacagaaatctggtcc tcctagtcatcaccttggtgccagcaggcaccgtacagatagtaaagatagtgagaaggaaaacaaaccattagtgaatc atacatcacagcgatctgagaacatacatagaatgtcatcttctccacaaccattacagaactctaacgatcagaaaaca aaggcttcagagtctgtaccagacacagataaaactagcatggacgtgctaaaatctgaggatcccagcgtgatagatgg aatggtggcagggaaggacagcagggaatctgaggagtttacacaggacatcaaagtcatatcacctgtactcgaggaat ccatgactgaagatgaagaagtgaaacagatagataatgcgttacaatctgctatggatgatgaggatcagctgatgtca cagttagaggcagagcaggacctggccctggagacggccatacatgcgttacaatccgctatggatgaggaggatcagct gacatcacagttagaggcagagcaggacctggccctggagacggccatacaggaggaagaatcctggttaaaggagctcg ctagggaggaaaatactgttatagaagtggagacagaaacagagacggaaaatgaattggggaacacaaccagttccctg gagctatcccagcctagcttggactgggatgctatagtagctcagtatgagtctcggtctgagagtgagaggaatcgctc ctggggagacatggttgaggaggatgaggtggaggctagaacaccaggacatgctgtacacatgcatgaaaaactctcat ctccatcaaggaaaagatcacctacagagtccaagaaaagacatgaacagaaacaagcaaaagctagagaactcagagaa aaattattgcaagaaaaagcagaaaggctaaaagacttatctaaaaaggttgaggaagtgagaagttggaaagaggaact gatgcaacaaagaaaaggtacaatacaacgtaaacttcagagggctgaagaaaagcgacaagtacaactcaaaatgaagg cacagaaagctcatgaggaagaggctaaggccaatgagatagcctttataaacacactggaagcccagaataagaagcat gatataatgtccaaacaccagacatcagaagccagactacaagacctacaggaagagaaaaagagaaagcatgaggagaa gctggccaaagaggcagctgtagaagagaggagaaaggccttagaggcagagaggcaggctagactaaaagaaatggagg aaaaacgaaggcagagatctgctagggcagagcaacaacagcttgagagggagaaagaaagagtggaaaatatcagagcc aaggaaagagagcgggaagaaagacttgctgttctaaatgctcaacatcagcaacacattcaagatctgcagaaaaaaat acagcaaaagcaagatgaaactacacagcgtcatcaggaggcgcttcaacaaatacgagaaaaggcgtttgagatgagtg tattacgtcactctactgaggaccacaatgatgtacctaatgttgtgccatatgaaaataagaagctctgcaccatctgt aatgtattgataacatcagaggtatatttgctgagccatttacgaggaaagaaacatcaacaggcattacaggataataa ctctggcaaagccatgtcaaaggaagaaattgaaagtttcaatttgaaacacatagttgatgctcctgtgaacagtaccc atcccaagattgtatcagagaaagaaagacttaaatccatgaaaaagagatcaaagaaattacgtcaaaggatgacgaca agaatacagaagagtgtacgagacattaacagatacttacagacccctgacactggaccctggcctcctaacaaagtgtc cttactagatagagctctcggtgaaattggaaggatcgttgataaaaagaataaccctgtgtataatagtagtgaagcct ctgctgaacgaatgacagtcacaggagccgatggtgttacagtcaggggaaacgatctcataagttacataattaacgtt ggtattgttgataagttaacacagtatttccgtggggtgcagggaccaatagatgacgataaggacggtgccgagttcct acagcatggactaggactgcttgtagctatgaccaaattcatgtccaaaaaaaattctgccatatttgagaaaaagaaga gcgaggatccaacacagctggctagcacatatgaggctacagagcttgtagggattgtctcccttctgtacgggatgtta ctccactcgggtgctccctccagatgcgagacagccccacccttactaccacaacacaccctagctgtcacactcaccgg tctcaaaatgctcaacaatatggcaaccttcaacatagatatgttacagaaatcattaggggaggagggtatgtctttag agtttcgtcacatcgccagtcacttgatgtggtactgtagacatcacgtgacagaggagctcctacatgaggttgtattg agcgtcggctacttcaccgtcctcaacccagataaccaggtggtgatacagtctggtcagtcccccactatcctccagca gttgtgttctctaccgttccagtatttcagtgatccccgtcttacaaacgttttgttcccgactctgatggcctgttgtt acaacaatcagtcaaacagggagattcttgaacaggaacttagctgtgttctactatctaacttcatagaggagaagctc ttagaattacaacaagcacccaaacaaccaagtaagaaagatatttatgaaaataatattgatcattattttaattacag ataa |
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Protein
| Protein ID | pfu_aug1.0_149.1_65269.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_149.1_65269.t1 MRSDNNEHNSRNSSASHRGGASRNNNSQVSNFTKPYRKQVLKALFEIGHFQPSDSGIKKKDYTSHKKSRSASESDQNMIN KNQQDVTKSPKSDGGSRKPDRRARFWKFLFDNLQRAVDAIYETCEQDESVVECKEVIMMLEQSTRDFKSLIEKLHMLRAY EESTKEGDRPPSIAWEVRKMSPGKSAGNSQGTSRSSPSPAQRVLQFSDQNKQEPKAVSATVCGNSWADKVRGASTTSPQK VLSPTTIKSPPPVLPSPPPKQNGHASDADTDGSTTIEDDNEGWETVHRGGKGKARNSPSQRSLENLSGVGKVPVKLKRTL SDPHSGMNKRPPWNHGASRRTPQKSGPPSHHLGASRHRTDSKDSEKENKPLVNHTSQRSENIHRMSSSPQPLQNSNDQKT KASESVPDTDKTSMDVLKSEDPSVIDGMVAGKDSRESEEFTQDIKVISPVLEESMTEDEEVKQIDNALQSAMDDEDQLMS QLEAEQDLALETAIHALQSAMDEEDQLTSQLEAEQDLALETAIQEEESWLKELAREENTVIEVETETETENELGNTTSSL ELSQPSLDWDAIVAQYESRSESERNRSWGDMVEEDEVEARTPGHAVHMHEKLSSPSRKRSPTESKKRHEQKQAKARELRE KLLQEKAERLKDLSKKVEEVRSWKEELMQQRKGTIQRKLQRAEEKRQVQLKMKAQKAHEEEAKANEIAFINTLEAQNKKH DIMSKHQTSEARLQDLQEEKKRKHEEKLAKEAAVEERRKALEAERQARLKEMEEKRRQRSARAEQQQLEREKERVENIRA KEREREERLAVLNAQHQQHIQDLQKKIQQKQDETTQRHQEALQQIREKAFEMSVLRHSTEDHNDVPNVVPYENKKLCTIC NVLITSEVYLLSHLRGKKHQQALQDNNSGKAMSKEEIESFNLKHIVDAPVNSTHPKIVSEKERLKSMKKRSKKLRQRMTT RIQKSVRDINRYLQTPDTGPWPPNKVSLLDRALGEIGRIVDKKNNPVYNSSEASAERMTVTGADGVTVRGNDLISYIINV GIVDKLTQYFRGVQGPIDDDKDGAEFLQHGLGLLVAMTKFMSKKNSAIFEKKKSEDPTQLASTYEATELVGIVSLLYGML LHSGAPSRCETAPPLLPQHTLAVTLTGLKMLNNMATFNIDMLQKSLGEEGMSLEFRHIASHLMWYCRHHVTEELLHEVVL SVGYFTVLNPDNQVVIQSGQSPTILQQLCSLPFQYFSDPRLTNVLFPTLMACCYNNQSNREILEQELSCVLLSNFIEEKL LELQQAPKQPSKKDIYENNIDHYFNYR |
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