Gene
| Gene Model ID | pfu_aug1.0_14933.1_25355 |
|---|---|
| Locus | scaffold14933.1 : 13476 ... 22242 : + |
| To GenomeBrowser | scaffold14933.1:13476..22242 |
| Genes list of scaffold | scaffold14933.1 |
| Synonym | pfu_aug2.0_12.1_06743 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_14933.1_25355.t1 | 1 | 1 | Aminotran_1_2 | 67 | 262 | 7.79963e-42 | 143.5 | 4.2039e-45 | 9.90017e-42 | 143.1 |
| pfu_aug1.0_14933.1_25355.t1 | 1 | 1 | Aminotran_5 | 109 | 227 | 2.4e-07 | 29.8 | 1.3e-10 | 3.3e-07 | 29.3 |
| pfu_aug1.0_14933.1_25355.t1 | 1 | 1 | Beta_elim_lyase | 124 | 242 | 1.2e-07 | 31.2 | 6.0e-11 | 1.5e-07 | 30.8 |
| pfu_aug1.0_14933.1_25355.t1 | 1 | 1 | DegT_DnrJ_EryC1 | 130 | 242 | 7.4e-07 | 28.5 | 4.8e-10 | 1.2e-06 | 27.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_14933.1_25355.t1 | gi|321476737|gb|EFX87697.1| | hypothetical protein DAPPUDRAFT_306563 [Daphnia pulex] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_14933.1_25355.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_14933.1_25355.t1 atgacgcgaaaacacacctccttttcaaccaatcagagaagaggtcaaagtttaaaatctaaaacattaagaatggagcc aaaagctaagagaatgagaaaggaatggcatgttccggcctcagaaatggcgaggaatacattcaacccaataaggagca ttgtggacggcatgaaactgaccccaaatccagagaaacaaatgattgcgctctctattggtgatcccacagttttccat aacttgccaatccctgaggacctagaggatgtcgtaatccagaaaataaaatcacgtaaattcaacggttataacccatc tattggttatgaagaatctcgccaagctgtggcagaatatacatctacagacactataaagtacacagctaaggacgtaa tattgacatcaggatgttctatggcccttgacctgtgtatatcagtactcgctaatagaggacagaatattttggtaccg agaccgggattctctatctacaagacgctggccgagtcacaaggcatccatgtcaagtactacgatctcatgcctgagag gtcctggcaggtagacatagagagtttggagtctgcgattgacagtaatacagccgccgttatcataaacaatccgtcca atccctgtggctcagtgttcagcagagatcatctattggatattctggatacagcctctcgtcataaactacccatcatc tcagatgaaatttatgagcatttttgctttcaatacccaaattacttcagaattgtcctaacaattcccaaagacaaagt ggtggtggcatgtgacaggatgagagatttctgtaacgaccattacatgaccatggtcaatggtcatacctag |
|
Protein
| Protein ID | pfu_aug1.0_14933.1_25355.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_14933.1_25355.t1 MTRKHTSFSTNQRRGQSLKSKTLRMEPKAKRMRKEWHVPASEMARNTFNPIRSIVDGMKLTPNPEKQMIALSIGDPTVFH NLPIPEDLEDVVIQKIKSRKFNGYNPSIGYEESRQAVAEYTSTDTIKYTAKDVILTSGCSMALDLCISVLANRGQNILVP RPGFSIYKTLAESQGIHVKYYDLMPERSWQVDIESLESAIDSNTAAVIINNPSNPCGSVFSRDHLLDILDTASRHKLPII SDEIYEHFCFQYPNYFRIVLTIPKDKVVVACDRMRDFCNDHYMTMVNGHT |
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