Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_14935.1_03566
Locus scaffold14935.1 : 3930 ... 9665 : -
To GenomeBrowser scaffold14935.1:3930..9665
Genes list of scaffold scaffold14935.1
Synonym pfu_aug2.0_392.1_07453

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_14935.1_03566.t1 1 1 MPP6 1 97 3.2e-19 69.2 7.3e-23 3.6e-19 69.0

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_14935.1_03566.t1 gi|21312048|ref|NP_081034.1| M-phase phosphoprotein 6 [Mus musculus] 3.0e-17

Transcript
Transcript IDpfu_aug1.0_14935.1_03566.t1
Definition-
>pfu_aug1.0_14935.1_03566.t1
atgcaaagaagtgcactaagagttgaaaaagaaaaaagtgaagaagagagacaaagagatattgacgatgagcactgggt
gttagatctgcctgaaacaaaacaaaaagagagcaaatatgtttttgatccaagctatacaagtgtagagcggctgtgtt
atggacgtatgtcatttaatggttttaatgttgaagttgagaaattaatgaagttacacaatatgtctgcagaattagaa
gcagctgaagaacgggagagagaaatcagtgttcctgataaagaaatggcaaacaggtactcggatatactagttcttca
atatatttattaa

Protein
Protein IDpfu_aug1.0_14935.1_03566.t1
Definition-
>pfu_aug1.0_14935.1_03566.t1
MQRSALRVEKEKSEEERQRDIDDEHWVLDLPETKQKESKYVFDPSYTSVERLCYGRMSFNGFNVEVEKLMKLHNMSAELE
AAEEREREISVPDKEMANRYSDILVLQYIY

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