Gene
| Gene Model ID | pfu_aug1.0_14939.1_54123 |
|---|---|
| Locus | scaffold14939.1 : 2355 ... 20797 : - |
| To GenomeBrowser | scaffold14939.1:2355..20797 |
| Genes list of scaffold | scaffold14939.1 |
| Synonym | pfu_aug2.0_1210.1_01475 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_14939.1_54123.t1 | 1 | 1 | DUF667 | 6 | 160 | 2.8e-24 | 85.4 | 3.3e-28 | 4.8e-24 | 84.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_14939.1_54123.t1 | gi|119585795|gb|EAW65391.1| | FLJ42117 protein, isoform CRA_i [Homo sapiens] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_14939.1_54123.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_14939.1_54123.t1 ggaggaccatattttgaagtatttactccacaaggaaaagactcgacagcgtcatggaaattgaatggaagcgtaaaaaa ggtctatgataaagaagtgaagggaaatgtgtgctccctggagggttcatcagccacaaccaaaatgcagcttcctaaag acagacaatcattgaccttgatacagcggtacttgattttccaaatcttcattccaagaggccaagagttctcctttgaa ttaggtgtgaccgatctttcaaacaataaaagacgtatattgttgtcaacttctcagaaggagagtcatgtgacccctct gcatgctaaagtcccactcacaatactacgcagacatgtatggcttaacctttgccttgacatggtttccttggtcagtg acctttggcgaggtcaaaccttcaaggccacagaaagtattacaatttcagcaaactgtaaactacgtagagttttcaca atgaagtctcaaccccctgacactgcaggagatgaagaaatgcatggttgtccttcaagtaacgtaggagaattagatca gatacctaaacaatgtcagtttgccacagacgttagctttgttactcagttgataaatgtgacaaagattaaacatgtag agagatttaaaggaggcggtgagacacaccgtcctgtgtcaaacatggaagtagatctgaatgccagtgggaggaggacg tcactcaacgactctaactatcatatagcgtttggtactaaagtacctggtgtgccaaaccaaagtaaaagcaagaattt gaccaaaattatgagctatcttcagtgtaatcaggacaaagatttaattactggtaatatgaaacagaaagttgtcaatg gattgtttttgtttttgctaaacaaaattacagtgacccgacttgtgacccttaagaaggatcaaattgctttgctttac cacgtggaattagagcaaattctaatcggcgtgcaaccacacatgcattgcatagcccctatttccacggcatgttttgc catacgtgaaatagacagatcagatgttcccatggcgatagtgcagccccaccctccaagggagccttcatctgatagac tacggcgcaagattagggtaaaaaacggagatgaaggtcttggatctgtgagtcaatccacctcagcaaagtccagtaaa tctggcagccagagttctcttccttcaggtaaagacctccgtaagaagaggattgtgtcggatggggagttactgtctaa caaccactccctgtcattgaggactgaccctcataatgccatcagtaagggaggagacagcggggtcgtatcattgtcag aatcagtgtcaggcatgggactgtctgactcactcaactacagaaaagagtataatagagaagattaccagggtgatggt gctgtattcgatgattccgtgtctgacgttatagatgtcctgaaacatggcattgttctccacgaagacttgtcatcggg cgatgaaagagaggattacgaagaaagtgaagaggaaccagagaaagacgatgtcatgtacttgttttcatctaaaccaa agaaagctcccagacgccatatctctcctaatttcttagagatggatgaaactgaaagtcaaatggtaagaagtcctaat acatcaagaggtgctaaatcacaacgtggtgcaaaatttgagaacgattttcacagtagtgattccagtagtcaggaaga cgaagatataagacgcaagaagcttccagggtcacgaccccagagtggtacatccagccgaccacacagtggcagcacca gtcgtcctcatagcggtaacacatcacgtcctcacagtggatccacaagtcggccacatagtggtacagctagtaaacca cacagtgcttcatctagggatgccgcaagtcctaaaggacagagacatagtgtagtgtcaaaatctcataggaaagataa acacagtgaggggcaaaactttaatcaagtgcccaagtttacgaatgtgagccctgaactcaggattagtacacagttac cgacccatcgatctgaggtgtctgtgaatggtaatagtactaatagaagtgtgtcacgcatgaataggaaatcattaaga gaaataccacaggatgacctcagactttctgttgtcaagtcagctgagaagccatacaacccccaggcgtatcagatggc agatattaccgagtcgtttgaggcccagatgtttgccagcatgaagagaagtgctgaggacgcaatggaagatgtatcta taaagtcccctaccagagttaacccccctcctgtagtaagccccaggaaaaccccacgcagcacacatccaggggaggga acctctgcacacagacatatatatgatttctcccctacactcactagtgatgatgatacaagtctcagtacatggaaagc tccgccaaaccagcaccataattatgagaatgagatgaagcccagcaggatgagtacagatacactcacgtcatcaaatc caagggactggagtggtgtatttagcccgcccattgttttcccgggggagagggccgactctacagaggatctctccatc agtagttcgtctccacgcaaagatacatcaagctcaggttatatgatttatatggaattatga |
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Protein
| Protein ID | pfu_aug1.0_14939.1_54123.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_14939.1_54123.t1 GGPYFEVFTPQGKDSTASWKLNGSVKKVYDKEVKGNVCSLEGSSATTKMQLPKDRQSLTLIQRYLIFQIFIPRGQEFSFE LGVTDLSNNKRRILLSTSQKESHVTPLHAKVPLTILRRHVWLNLCLDMVSLVSDLWRGQTFKATESITISANCKLRRVFT MKSQPPDTAGDEEMHGCPSSNVGELDQIPKQCQFATDVSFVTQLINVTKIKHVERFKGGGETHRPVSNMEVDLNASGRRT SLNDSNYHIAFGTKVPGVPNQSKSKNLTKIMSYLQCNQDKDLITGNMKQKVVNGLFLFLLNKITVTRLVTLKKDQIALLY HVELEQILIGVQPHMHCIAPISTACFAIREIDRSDVPMAIVQPHPPREPSSDRLRRKIRVKNGDEGLGSVSQSTSAKSSK SGSQSSLPSGKDLRKKRIVSDGELLSNNHSLSLRTDPHNAISKGGDSGVVSLSESVSGMGLSDSLNYRKEYNREDYQGDG AVFDDSVSDVIDVLKHGIVLHEDLSSGDEREDYEESEEEPEKDDVMYLFSSKPKKAPRRHISPNFLEMDETESQMVRSPN TSRGAKSQRGAKFENDFHSSDSSSQEDEDIRRKKLPGSRPQSGTSSRPHSGSTSRPHSGNTSRPHSGSTSRPHSGTASKP HSASSRDAASPKGQRHSVVSKSHRKDKHSEGQNFNQVPKFTNVSPELRISTQLPTHRSEVSVNGNSTNRSVSRMNRKSLR EIPQDDLRLSVVKSAEKPYNPQAYQMADITESFEAQMFASMKRSAEDAMEDVSIKSPTRVNPPPVVSPRKTPRSTHPGEG TSAHRHIYDFSPTLTSDDDTSLSTWKAPPNQHHNYENEMKPSRMSTDTLTSSNPRDWSGVFSPPIVFPGERADSTEDLSI SSSSPRKDTSSSGYMIYMEL |
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