Gene
| Gene Model ID | pfu_aug1.0_14944.1_03569 |
|---|---|
| Locus | scaffold14944.1 : 11230 ... 22400 : - |
| To GenomeBrowser | scaffold14944.1:11230..22400 |
| Genes list of scaffold | scaffold14944.1 |
| Synonym | pfu_aug2.0_1664.1_15181 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_14944.1_03569.t1 | 1 | 1 | Glyco_hydro_18 | 1 | 180 | 5.29691e-43 | 147.7 | 0.0 | 8.09951e-43 | 147.1 |
| pfu_aug1.0_14944.1_03569.t1 | 1 | 1 | CBM_14 | 210 | 261 | 1.1e-13 | 50.8 | 3.2e-17 | 2.4e-13 | 49.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_14944.1_03569.t1 | gi|92110434|emb|CAI96027.1| | Chit3 protein [Crassostrea gigas] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_14944.1_03569.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_14944.1_03569.t1 gaattaagagcagctttcgataaagagggaagacaaaaagcaagatccccattactattaacagccgcggtagccgcagg gaagaaaacaattgactcagcatatgaaggagcaacattgggacggtatatggattttatcagtattatgacgtacgatc ttcacgggagctgggaaaatgtcacaggtcataacagtcctttgtatgcaagatcaggagaaaccaaagctgaacgcttc ctaaatatggattgggccatgaactattggttaattaaccaaaatttacccagagagaagatgaatgttggattagctct ttatggacgatcattcaccctagcaagtcgtcgtagacatatggtagggtcgccaatcaaagcgggagacttgggtaaag gacgtgctggtaaattcaccagagagggtggattcctgtcatactatgagatatgtaaaagtctgaagaatggagcagag aaattctacatagatgaacaaagagttccctacctagtggacaatgatcagtgggtggggccaataaaactgacacattt aagaaaatttatctttaaaatgttcctttcagaacgtaaacgacgacctctgaagacaggtttcacgtgtgaaaagggaa tcgatggttatttccctagcccaacatcttgttcggagtattaccaatgtaccgaaggcactgcgtatcatttccactgc gcccctggtttggagtttagcgaagtcgagaatttgtgtaattggcctgataaagtgaagtgtacaagaccaattgtaga taatactccatcagtaaatgcacttgtaacaccaacaccatttgatctttcacccacacaatacccacatgagtctgccg ctgccgccgccgccgctgctgcagctgtcaacaacataatgccgaccccgaatgcgccatggaatgccaatacccccata caaaaacaacttccacctgaaccaaattggcagcaacaaccaaagcccgattggcaacaaccgaaaccagactggcaaca accgaaaccagactggcagcaaccaaatccaaactggcagcaaccaaacccagcccaggcaatcaaacccatggatccag tcatccctgacatgccctcaatgaacaacatcaatatgatccaacagccacctcctacatttgcaccagaaccggctaaa attaatgtccaaaacccaatgggagcggcaagaaattggggttgggctttgctccaaggcacaactatgccgtcttattg gaattgtaagtatatttgtatgaactctaaaagtttaatttcgtaa |
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Protein
| Protein ID | pfu_aug1.0_14944.1_03569.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_14944.1_03569.t1 ELRAAFDKEGRQKARSPLLLTAAVAAGKKTIDSAYEGATLGRYMDFISIMTYDLHGSWENVTGHNSPLYARSGETKAERF LNMDWAMNYWLINQNLPREKMNVGLALYGRSFTLASRRRHMVGSPIKAGDLGKGRAGKFTREGGFLSYYEICKSLKNGAE KFYIDEQRVPYLVDNDQWVGPIKLTHLRKFIFKMFLSERKRRPLKTGFTCEKGIDGYFPSPTSCSEYYQCTEGTAYHFHC APGLEFSEVENLCNWPDKVKCTRPIVDNTPSVNALVTPTPFDLSPTQYPHESAAAAAAAAAAVNNIMPTPNAPWNANTPI QKQLPPEPNWQQQPKPDWQQPKPDWQQPKPDWQQPNPNWQQPNPAQAIKPMDPVIPDMPSMNNINMIQQPPPTFAPEPAK INVQNPMGAARNWGWALLQGTTMPSYWNCKYICMNSKSLIS |
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