Gene
| Gene Model ID | pfu_aug1.0_14946.1_61429 |
|---|---|
| Locus | scaffold14946.1 : 3806 ... 26351 : + |
| To GenomeBrowser | scaffold14946.1:3806..26351 |
| Genes list of scaffold | scaffold14946.1 |
| Synonym | pfu_aug2.0_472.1_07562 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_14946.1_61429.t1 | 1 | 1 | Glyco_transf_7N | 110 | 227 | 1.4013e-45 | 153.5 | 0.0 | 2.8026e-45 | 152.9 |
| pfu_aug1.0_14946.1_61429.t1 | 2 | 1 | Glyco_transf_7C | 160 | 184 | 1.2e-17 | 63.1 | 0.98 | 4800.0 | -3.0 |
| pfu_aug1.0_14946.1_61429.t1 | 2 | 2 | Glyco_transf_7C | 231 | 283 | 1.2e-17 | 63.1 | 4.7e-21 | 2.3e-17 | 62.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_14946.1_61429.t1 | gi|307177276|gb|EFN66454.1| | Beta-1,4-N-acetylgalactosaminyltransferase bre-4 [Camponotus floridanus] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_14946.1_61429.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_14946.1_61429.t1 atgggttgtaaagcttcctacattttcgatgataactatgtcaaaacaaggaggggatttccaacaagactcggttgcag caccaacagtaacacaccaaacaccccaagtaaaaacacatacagcaaaagacaaggaacagcaaacgagacatcaaaca tcgaacataaaaggcaacacataaatcaacgagacctatgggcactcggtgccgacttaggacggccatcagccacgtta gtaacagatggtgtggttaacctggattacgtgcgcacaaccctcccactttaccggttacccaaagttgggcgtgtggt gacggcagtcagtagtccctcctttgaagacctggaaactcagtacaaagatctcatttctggaggtcgtcactcgccat ctgaatgtctggctagacacaacgtggctgttatcatcgcctacaggaacagagaagaccacctcaagacgctgttgtat aacttacacggctacttacagaggcagcaactgtattatggaatatttgttatagaacaggcaggtgtgaccaggtttaa cagggcgatgctgatgaacattggatttaaggaagccatcgccagttctaactttacttgttttattttccacgatgttg atcacattccagagaatgacaacaatatctatggctgttccggaaaccctcatcacttagctgtagctgtagagaaaaat aaatacaggcgtttatacaccacatattttgggggtgtatcagccctctcccgccgtactgtggaggacgtgaatggatt ctctaacttgtattttggttggggcggagaggacgacgacatgtggcgaagtctattcagaatcatatcaaaagaacgta ttggaagttttgtgcgagacttcatagaagaggatattcagtggtacgacctacagcagatgtcggcagatacaggacgt taccccatggacgggacaagggaaacgaagccaaccgcttaa |
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Protein
| Protein ID | pfu_aug1.0_14946.1_61429.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_14946.1_61429.t1 MGCKASYIFDDNYVKTRRGFPTRLGCSTNSNTPNTPSKNTYSKRQGTANETSNIEHKRQHINQRDLWALGADLGRPSATL VTDGVVNLDYVRTTLPLYRLPKVGRVVTAVSSPSFEDLETQYKDLISGGRHSPSECLARHNVAVIIAYRNREDHLKTLLY NLHGYLQRQQLYYGIFVIEQAGVTRFNRAMLMNIGFKEAIASSNFTCFIFHDVDHIPENDNNIYGCSGNPHHLAVAVEKN KYRRLYTTYFGGVSALSRRTVEDVNGFSNLYFGWGGEDDDMWRSLFRIISKERIGSFVRDFIEEDIQWYDLQQMSADTGR YPMDGTRETKPTA |
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