Gene
| Gene Model ID | pfu_aug1.0_14960.1_18181 |
|---|---|
| Locus | scaffold14960.1 : 306 ... 13042 : + |
| To GenomeBrowser | scaffold14960.1:306..13042 |
| Genes list of scaffold | scaffold14960.1 |
| Synonym | pfu_aug2.0_363.1_10667 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_14960.1_18181.t1 | 1 | 1 | Tetraspannin | 2 | 171 | 6.4e-21 | 74.6 | 8.7e-25 | 1.3e-20 | 73.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_14960.1_18181.t1 | gi|119605461|gb|EAW85055.1| | tetraspanin 17, isoform CRA_c, partial [Homo sapiens] | 2.0e-12 |
Transcript
| Transcript ID | pfu_aug1.0_14960.1_18181.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_14960.1_18181.t1 atgactggctgctgcggtacaatggccaagtgcctgcttattctcttcaacttgatcttttggtatgtgttcttcctcgt tcttatcattggtggtgaaattgccggaggtgttcttatgattctgtacaagaacaggattgagggagatctcaccaaaa ttcttcaagacacaataaaacagaagtatgccactaatacaaatgtacaaaatgcctggaattttgtacaagtagagctt agctgctgcggggctactggagcatcagattatgccaatgtctcctctacatcgacccttggatttccccttacttgctg cgaactgacagacaaagacgctgctctgaacgatccattggcggctacgccacgtaaccgtacagaatgtggcaatcaga aatcacccttctaccataacaagggatgtaaagatcagctactggacctggcttcacgttacagtataatcctcattgtt atagccatggtaattggaggactggagtttcgcttagcgtttacacggcagaatttgttgcgcaataaagttattgcgga acaaattgacaatttattgcgcaataaattttgtcgtgtgaacgcaaaacaaatttattgcgcaacaaattaa |
|
Protein
| Protein ID | pfu_aug1.0_14960.1_18181.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_14960.1_18181.t1 MTGCCGTMAKCLLILFNLIFWYVFFLVLIIGGEIAGGVLMILYKNRIEGDLTKILQDTIKQKYATNTNVQNAWNFVQVEL SCCGATGASDYANVSSTSTLGFPLTCCELTDKDAALNDPLAATPRNRTECGNQKSPFYHNKGCKDQLLDLASRYSIILIV IAMVIGGLEFRLAFTRQNLLRNKVIAEQIDNLLRNKFCRVNAKQIYCATN |
|