Gene
| Gene Model ID | pfu_aug1.0_15.1_14688 |
|---|---|
| Locus | scaffold15.1 : 118105 ... 124945 : - |
| To GenomeBrowser | scaffold15.1:118105..124945 |
| Genes list of scaffold | scaffold15.1 |
| Synonym | pfu_aug2.0_3130.1_02340 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_15.1_14688.t1 | 1 | 1 | Methyltransf_23 | 35 | 218 | 4.7e-06 | 26.4 | 3.9e-09 | 7.2e-06 | 25.8 |
| pfu_aug1.0_15.1_14688.t1 | 2 | 1 | Methyltransf_12 | 36 | 133 | 4.1e-07 | 30.3 | 1.3e-09 | 2.4e-06 | 27.9 |
| pfu_aug1.0_15.1_14688.t1 | 1 | 1 | Methyltransf_11 | 37 | 135 | 1.9e-09 | 37.8 | 1.8e-12 | 3.4e-09 | 37.0 |
| pfu_aug1.0_15.1_14688.t1 | 2 | 2 | Methyltransf_12 | 189 | 212 | 4.1e-07 | 30.3 | 0.68 | 1300.0 | -0.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_15.1_14688.t1 | gi|121624846|gb|ABM63527.1| | BryB [Candidatus Endobugula sertula] | 1.0e-13 |
Transcript
| Transcript ID | pfu_aug1.0_15.1_14688.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15.1_14688.t1 atgtctagtgcaatagcaactttgaacaaccggggatatcagatggcgacaccaagtcctctcttacaggactggttatc atcttatgatggtcagcgtcccttaatggacataggatgtgcatatggtataaataccatcaaggcactggaactcggaa tacctacagttagcatggatccagaagagaaacatctgggtattctccgccaaaatattgataaagaatatcgtcatttg tccacatgtgttatgggagaacttccatacagcattccattttccgatcattatttttccggaattctttgtgccgaagt attccattttctggatggaaagagcatagaaacatccgtggatcttatttatagaaaacttgttccaaacggaaaatttg ttatgacaatggcgtccgacaagctgcttgaatatatcgataaggatatgcatacaaaattcacggaaaatcttgataga ggtctaaaatggccaggagagatgcttatggatgctgaatttacaatgaaattcaaaagcatttttaaaaacgataaaat cagatctgaaatcgaccatattttcggaaatcttcatcatttctgctctgtagaacaaataacagaagtactacaacacc ggggatttgggattctgcgtgcaaacgttggtgaacaccctgggcatgaggatccagagggtctgggtattgtaccgaaa agaagtttgcttgtcgttgcacaaaaactttaa |
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Protein
| Protein ID | pfu_aug1.0_15.1_14688.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15.1_14688.t1 MSSAIATLNNRGYQMATPSPLLQDWLSSYDGQRPLMDIGCAYGINTIKALELGIPTVSMDPEEKHLGILRQNIDKEYRHL STCVMGELPYSIPFSDHYFSGILCAEVFHFLDGKSIETSVDLIYRKLVPNGKFVMTMASDKLLEYIDKDMHTKFTENLDR GLKWPGEMLMDAEFTMKFKSIFKNDKIRSEIDHIFGNLHHFCSVEQITEVLQHRGFGILRANVGEHPGHEDPEGLGIVPK RSLLVVAQKL |
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