Gene
| Gene Model ID | pfu_aug1.0_150080.1_49932 |
|---|---|
| Locus | scaffold150080.1 : 90 ... 956 : - |
| To GenomeBrowser | scaffold150080.1:90..956 |
| Genes list of scaffold | scaffold150080.1 |
| Synonym | pfu_aug2.0_58.1_26768 |
Manual annotation
| Study field | other |
|---|---|
| Gene name | calmodulin like |
| Description | Blast best hit to NCBI EGD74330.1 (Salpingoeca sp) |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_150080.1_49932.t1 | 3 | 1 | EF-hand_6 | 1 | 13 | 1.4e-17 | 61.9 | 0.027 | 36.0 | 4.5 |
| pfu_aug1.0_150080.1_49932.t1 | 3 | 1 | EF-hand_5 | 1 | 10 | 2.2e-14 | 52.0 | 0.075 | 100.0 | 2.5 |
| pfu_aug1.0_150080.1_49932.t1 | 3 | 1 | EF-hand_1 | 1 | 13 | 5.2e-25 | 84.7 | 0.00042 | 0.56 | 9.6 |
| pfu_aug1.0_150080.1_49932.t1 | 2 | 1 | EF-hand_7 | 2 | 11 | 1.2e-21 | 76.6 | 0.25 | 330.0 | 1.5 |
| pfu_aug1.0_150080.1_49932.t1 | 2 | 1 | EF-hand_8 | 2 | 43 | 2.0e-22 | 78.5 | 3.3e-09 | 4.5e-06 | 26.1 |
| pfu_aug1.0_150080.1_49932.t1 | 3 | 2 | EF-hand_6 | 23 | 52 | 1.4e-17 | 61.9 | 3.6e-13 | 4.8e-10 | 38.4 |
| pfu_aug1.0_150080.1_49932.t1 | 3 | 2 | EF-hand_1 | 23 | 51 | 5.2e-25 | 84.7 | 1.4e-13 | 1.9e-10 | 39.2 |
| pfu_aug1.0_150080.1_49932.t1 | 2 | 2 | EF-hand_7 | 24 | 84 | 1.2e-21 | 76.6 | 8.5e-25 | 1.2e-21 | 76.6 |
| pfu_aug1.0_150080.1_49932.t1 | 3 | 2 | EF-hand_5 | 24 | 48 | 2.2e-14 | 52.0 | 1.2e-10 | 1.6e-07 | 30.3 |
| pfu_aug1.0_150080.1_49932.t1 | 2 | 2 | EF-hand_8 | 36 | 85 | 2.0e-22 | 78.5 | 2.3e-20 | 3.1e-17 | 61.9 |
| pfu_aug1.0_150080.1_49932.t1 | 3 | 3 | EF-hand_1 | 59 | 85 | 5.2e-25 | 84.7 | 3.7e-13 | 5.0e-10 | 37.9 |
| pfu_aug1.0_150080.1_49932.t1 | 3 | 3 | EF-hand_5 | 63 | 84 | 2.2e-14 | 52.0 | 5.8e-07 | 0.00078 | 18.6 |
| pfu_aug1.0_150080.1_49932.t1 | 3 | 3 | EF-hand_6 | 65 | 85 | 1.4e-17 | 61.9 | 2.8e-06 | 0.0038 | 17.0 |
Transcript
| Transcript ID | pfu_aug1.0_150080.1_49932.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_150080.1_49932.t1 tacaatagacttttctgaatttctgtcgatgatgtcaagaaaaatgaaagaaacagacacagaagacgaactccgagaag ctttcaaagtattcgacaaagacggcaacggattcataagtgccgctgaattacgtcacgtaatgacgaatctcggagaa aaactcacagatgaggaggtggacgagatgatacgagaagctgatattgatggtgacggtcaagttaattatgatgaatt cgttaaaatgatgaaaccaggccagaagtga |
|
Protein
| Protein ID | pfu_aug1.0_150080.1_49932.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_150080.1_49932.t1 TIDFSEFLSMMSRKMKETDTEDELREAFKVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYDEF VKMMKPGQK |
|