Gene
| Gene Model ID | pfu_aug1.0_15042.1_39662 |
|---|---|
| Locus | scaffold15042.1 : 1 ... 17891 : + |
| To GenomeBrowser | scaffold15042.1:1..17891 |
| Genes list of scaffold | scaffold15042.1 |
| Synonym | pfu_aug2.0_149.1_30296 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_15042.1_39662.t1 | 3 | 1 | LRR_9 | 68 | 205 | 5.4e-16 | 58.6 | 2.6e-10 | 5.6e-07 | 29.2 |
| pfu_aug1.0_15042.1_39662.t1 | 5 | 1 | LRR_8 | 70 | 123 | 5.7e-20 | 70.8 | 2.2e-06 | 0.0047 | 16.6 |
| pfu_aug1.0_15042.1_39662.t1 | 11 | 1 | LRR_6 | 70 | 83 | 1.0e-07 | 31.2 | 0.0098 | 21.0 | 5.6 |
| pfu_aug1.0_15042.1_39662.t1 | 7 | 1 | LRR_4 | 71 | 110 | 4.9e-34 | 115.3 | 8.1e-10 | 1.7e-06 | 27.4 |
| pfu_aug1.0_15042.1_39662.t1 | 12 | 1 | LRR_1 | 71 | 86 | 4.9e-11 | 41.0 | 0.0099 | 21.0 | 5.6 |
| pfu_aug1.0_15042.1_39662.t1 | 11 | 1 | LRR_7 | 72 | 83 | 9.7e-08 | 31.0 | 0.018 | 38.0 | 5.0 |
| pfu_aug1.0_15042.1_39662.t1 | 11 | 2 | LRR_6 | 91 | 105 | 1.0e-07 | 31.2 | 0.049 | 100.0 | 3.4 |
| pfu_aug1.0_15042.1_39662.t1 | 12 | 2 | LRR_1 | 93 | 111 | 4.9e-11 | 41.0 | 0.0048 | 10.0 | 6.6 |
| pfu_aug1.0_15042.1_39662.t1 | 11 | 2 | LRR_7 | 93 | 106 | 9.7e-08 | 31.0 | 0.009 | 19.0 | 6.0 |
| pfu_aug1.0_15042.1_39662.t1 | 7 | 2 | LRR_4 | 114 | 152 | 4.9e-34 | 115.3 | 2.8e-06 | 0.0059 | 16.1 |
| pfu_aug1.0_15042.1_39662.t1 | 5 | 2 | LRR_8 | 114 | 162 | 5.7e-20 | 70.8 | 0.0028 | 5.9 | 6.7 |
| pfu_aug1.0_15042.1_39662.t1 | 12 | 3 | LRR_1 | 114 | 132 | 4.9e-11 | 41.0 | 0.09 | 190.0 | 2.7 |
| pfu_aug1.0_15042.1_39662.t1 | 11 | 3 | LRR_7 | 129 | 147 | 9.7e-08 | 31.0 | 0.28 | 590.0 | 1.5 |
| pfu_aug1.0_15042.1_39662.t1 | 11 | 3 | LRR_6 | 129 | 147 | 1.0e-07 | 31.2 | 0.4 | 850.0 | 0.6 |
| pfu_aug1.0_15042.1_39662.t1 | 7 | 3 | LRR_4 | 134 | 166 | 4.9e-34 | 115.3 | 1.3e-05 | 0.027 | 14.1 |
| pfu_aug1.0_15042.1_39662.t1 | 12 | 4 | LRR_1 | 134 | 152 | 4.9e-11 | 41.0 | 0.18 | 380.0 | 1.8 |
| pfu_aug1.0_15042.1_39662.t1 | 11 | 4 | LRR_6 | 151 | 164 | 1.0e-07 | 31.2 | 0.071 | 150.0 | 2.9 |
| pfu_aug1.0_15042.1_39662.t1 | 11 | 4 | LRR_7 | 152 | 163 | 9.7e-08 | 31.0 | 0.38 | 810.0 | 1.1 |
| pfu_aug1.0_15042.1_39662.t1 | 12 | 5 | LRR_1 | 153 | 176 | 4.9e-11 | 41.0 | 0.032 | 68.0 | 4.0 |
| pfu_aug1.0_15042.1_39662.t1 | 3 | 2 | LRR_9 | 206 | 280 | 5.4e-16 | 58.6 | 0.0019 | 4.0 | 6.9 |
| pfu_aug1.0_15042.1_39662.t1 | 5 | 3 | LRR_8 | 223 | 278 | 5.7e-20 | 70.8 | 3.1e-07 | 0.00065 | 19.4 |
| pfu_aug1.0_15042.1_39662.t1 | 7 | 4 | LRR_4 | 246 | 281 | 4.9e-34 | 115.3 | 8.7e-10 | 1.8e-06 | 27.3 |
| pfu_aug1.0_15042.1_39662.t1 | 12 | 6 | LRR_1 | 246 | 262 | 4.9e-11 | 41.0 | 0.0012 | 2.6 | 8.3 |
| pfu_aug1.0_15042.1_39662.t1 | 11 | 5 | LRR_7 | 246 | 260 | 9.7e-08 | 31.0 | 0.13 | 280.0 | 2.5 |
| pfu_aug1.0_15042.1_39662.t1 | 11 | 5 | LRR_6 | 246 | 259 | 1.0e-07 | 31.2 | 0.016 | 33.0 | 4.9 |
| pfu_aug1.0_15042.1_39662.t1 | 11 | 6 | LRR_6 | 266 | 280 | 1.0e-07 | 31.2 | 0.002 | 4.2 | 7.7 |
| pfu_aug1.0_15042.1_39662.t1 | 11 | 6 | LRR_7 | 267 | 281 | 9.7e-08 | 31.0 | 0.003 | 6.3 | 7.4 |
| pfu_aug1.0_15042.1_39662.t1 | 12 | 7 | LRR_1 | 268 | 282 | 4.9e-11 | 41.0 | 0.0067 | 14.0 | 6.1 |
| pfu_aug1.0_15042.1_39662.t1 | 7 | 5 | LRR_4 | 318 | 354 | 4.9e-34 | 115.3 | 1.9e-09 | 3.9e-06 | 26.3 |
| pfu_aug1.0_15042.1_39662.t1 | 5 | 4 | LRR_8 | 318 | 375 | 5.7e-20 | 70.8 | 7.6e-11 | 1.6e-07 | 30.9 |
| pfu_aug1.0_15042.1_39662.t1 | 11 | 7 | LRR_6 | 318 | 334 | 1.0e-07 | 31.2 | 0.00025 | 0.53 | 10.5 |
| pfu_aug1.0_15042.1_39662.t1 | 12 | 8 | LRR_1 | 319 | 337 | 4.9e-11 | 41.0 | 0.0046 | 9.7 | 6.6 |
| pfu_aug1.0_15042.1_39662.t1 | 11 | 7 | LRR_7 | 319 | 332 | 9.7e-08 | 31.0 | 0.017 | 35.0 | 5.2 |
| pfu_aug1.0_15042.1_39662.t1 | 3 | 3 | LRR_9 | 341 | 445 | 5.4e-16 | 58.6 | 5.4e-09 | 1.2e-05 | 25.0 |
| pfu_aug1.0_15042.1_39662.t1 | 11 | 8 | LRR_6 | 341 | 354 | 1.0e-07 | 31.2 | 0.23 | 500.0 | 1.3 |
| pfu_aug1.0_15042.1_39662.t1 | 11 | 8 | LRR_7 | 342 | 354 | 9.7e-08 | 31.0 | 0.68 | 1400.0 | 0.3 |
| pfu_aug1.0_15042.1_39662.t1 | 12 | 9 | LRR_1 | 343 | 360 | 4.9e-11 | 41.0 | 0.19 | 400.0 | 1.7 |
| pfu_aug1.0_15042.1_39662.t1 | 7 | 6 | LRR_4 | 349 | 381 | 4.9e-34 | 115.3 | 1.9e-05 | 0.04 | 13.5 |
| pfu_aug1.0_15042.1_39662.t1 | 11 | 9 | LRR_6 | 365 | 377 | 1.0e-07 | 31.2 | 0.94 | 2000.0 | -0.6 |
| pfu_aug1.0_15042.1_39662.t1 | 5 | 5 | LRR_8 | 366 | 422 | 5.7e-20 | 70.8 | 2.7e-11 | 5.8e-08 | 32.3 |
| pfu_aug1.0_15042.1_39662.t1 | 12 | 10 | LRR_1 | 366 | 384 | 4.9e-11 | 41.0 | 0.032 | 68.0 | 4.0 |
| pfu_aug1.0_15042.1_39662.t1 | 11 | 9 | LRR_7 | 366 | 377 | 9.7e-08 | 31.0 | 0.12 | 250.0 | 2.6 |
| pfu_aug1.0_15042.1_39662.t1 | 7 | 7 | LRR_4 | 389 | 423 | 4.9e-34 | 115.3 | 1.2e-09 | 2.6e-06 | 26.9 |
| pfu_aug1.0_15042.1_39662.t1 | 12 | 11 | LRR_1 | 389 | 405 | 4.9e-11 | 41.0 | 0.0042 | 9.0 | 6.7 |
| pfu_aug1.0_15042.1_39662.t1 | 11 | 10 | LRR_7 | 389 | 403 | 9.7e-08 | 31.0 | 0.014 | 30.0 | 5.4 |
| pfu_aug1.0_15042.1_39662.t1 | 11 | 10 | LRR_6 | 389 | 402 | 1.0e-07 | 31.2 | 0.014 | 30.0 | 5.1 |
| pfu_aug1.0_15042.1_39662.t1 | 12 | 12 | LRR_1 | 411 | 423 | 4.9e-11 | 41.0 | 0.0035 | 7.3 | 7.0 |
| pfu_aug1.0_15042.1_39662.t1 | 11 | 11 | LRR_7 | 411 | 423 | 9.7e-08 | 31.0 | 0.018 | 37.0 | 5.1 |
| pfu_aug1.0_15042.1_39662.t1 | 11 | 11 | LRR_6 | 411 | 422 | 1.0e-07 | 31.2 | 0.061 | 130.0 | 3.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_15042.1_39662.t1 | gi|115696704|ref|XP_784143.2| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_15042.1_39662.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15042.1_39662.t1 ttccggtcgaagtctccctttgcacctttcaatgatgtgttgttagataacagggagtgtaaaataccagcggtacctca tgtagaggaagacaaggtggcagataatgatgtcattgatatggagccgatggttaaaccaagacctcgaataacagtac tgaatgatgatttgattttgagagctgctggagctgaagcttttgaacatattacagtgctaaatcttcatgataatgga ctgacaaaagtcaagcccctacatgctcttaaagagctcaaaaggctcacactgagctttaatgagcttaccaggcttga tgaactttcacacatggttacgtcactgaacttggatggtcagcacatcaccaagctgtcagggttagagaaactggaca atctaaagtatgcttccttcaacaacaatgacattacaaagctagaggtgctgaccagcctggtgatattagatctctat ggtaaccctgttgcctcggaaactgacaactatcgtctcttcatcatctatcatctcaagaacctcaaggccctggatgg ctcagctattgaggccatggaaggtaatcaggccaaggacacgtttggggggaggctgaccccggacttcgtagccgaga aactaggtcactcaaacttccaagatgtccgagaactagatctacccaactccagcgtgagaatagtagatctgggtatg ggagatgctttcattaacttgagaagcgtgaatcttgagcacaacaacttgacgtcatttagtggtcttattcaccttcc aaatttacgggtgctatgtttaaaccataaccatgtggaatgtatcatgccaaaacagaaaccgatgtcaaacaaaccgg tacgaatgaaccagggtaattctcgcagcttggatttactgaatggagatatgtcactgacgcccattatggagaatcta gaagttctgcatttagggtataatggtatcaaagatatggctgtgttacaactcagtaggctgacctcattaaaggcttt attcctgcaaggaaacgagattatggtcatcaacggtctagaaggtctacatgatttacgggaactggtgctagacagaa ataaggtcaagaacgtgtctgagacgtcgtttaacaatcagtggaatctacaagagctccacctggaggagaacaggata cgtgacctctcaaacctcaactgtatggataacctccagaggttgtacctcggatcaaatagaattcaggctgctcgtcg acatttgcatcgtcctatactggtgtttaagttgaagcagatacttgttatagacgaataa |
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Protein
| Protein ID | pfu_aug1.0_15042.1_39662.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15042.1_39662.t1 FRSKSPFAPFNDVLLDNRECKIPAVPHVEEDKVADNDVIDMEPMVKPRPRITVLNDDLILRAAGAEAFEHITVLNLHDNG LTKVKPLHALKELKRLTLSFNELTRLDELSHMVTSLNLDGQHITKLSGLEKLDNLKYASFNNNDITKLEVLTSLVILDLY GNPVASETDNYRLFIIYHLKNLKALDGSAIEAMEGNQAKDTFGGRLTPDFVAEKLGHSNFQDVRELDLPNSSVRIVDLGM GDAFINLRSVNLEHNNLTSFSGLIHLPNLRVLCLNHNHVECIMPKQKPMSNKPVRMNQGNSRSLDLLNGDMSLTPIMENL EVLHLGYNGIKDMAVLQLSRLTSLKALFLQGNEIMVINGLEGLHDLRELVLDRNKVKNVSETSFNNQWNLQELHLEENRI RDLSNLNCMDNLQRLYLGSNRIQAARRHLHRPILVFKLKQILVIDE |
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