Gene
| Gene Model ID | pfu_aug1.0_15055.1_18185 |
|---|---|
| Locus | scaffold15055.1 : 8085 ... 12709 : - |
| To GenomeBrowser | scaffold15055.1:8085..12709 |
| Genes list of scaffold | scaffold15055.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_15055.1_18185.t1 | 2 | 1 | WD40 | 61 | 90 | 4.5e-08 | 32.6 | 1.3e-08 | 0.00019 | 21.1 |
| pfu_aug1.0_15055.1_18185.t1 | 2 | 2 | WD40 | 106 | 152 | 4.5e-08 | 32.6 | 7.1e-06 | 0.1 | 12.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_15055.1_18185.t1 | gi|147904214|ref|NP_001090645.1| | WD repeat-containing protein 90 [Xenopus (Silurana) tropicalis] | 4.0e-38 |
Transcript
| Transcript ID | pfu_aug1.0_15055.1_18185.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15055.1_18185.t1 atgaaagccccaggagataatggcagaaacggagctatcaccatggaagacgagatgaacctggatggtgcaataactac agcagcttttgacgagagtctcgaaatgggcatcgttgggacatcagcaggaactatatggtatatcaactggccagaac gtaccagtatcagacttgtgtcaagtcatgtatacaaggttaatggactggcatgtattaatggtcatatagcttcctgt gctgatgatggcagtcttaggttatggtccatagaaaatcgtgaacaagtgctgcagttccaggttctagatcagacctg tacatgtgttgcatttagtccgcaaaaatctcgaccagacccaaattatcagagtcaagatcctgattctgctgaagaaa agatactgtctaatgtcactgctggttacagtgacggaacaatacgcatgtttgacgttaacaaactatacatttgttag |
|
Protein
| Protein ID | pfu_aug1.0_15055.1_18185.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15055.1_18185.t1 MKAPGDNGRNGAITMEDEMNLDGAITTAAFDESLEMGIVGTSAGTIWYINWPERTSIRLVSSHVYKVNGLACINGHIASC ADDGSLRLWSIENREQVLQFQVLDQTCTCVAFSPQKSRPDPNYQSQDPDSAEEKILSNVTAGYSDGTIRMFDVNKLYIC |
|