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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_15057.1_68813
Locus scaffold15057.1 : 1 ... 10505 : -
To GenomeBrowser scaffold15057.1:1..10505
Genes list of scaffold scaffold15057.1
Synonym pfu_aug2.0_71.1_03559

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_15057.1_68813.t1 1 1 AIRS 218 280 1.0e-11 44.9 4.3e-15 2.1e-11 43.9
pfu_aug1.0_15057.1_68813.t1 1 1 AIRS_C 327 474 1.3e-16 60.9 4.4e-20 2.2e-16 60.2

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 2
egg-Dshape 1
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_15057.1_68813.t1
Definition-
>pfu_aug1.0_15057.1_68813.t1
atgtgtgttgtagagttgaccctggaggaacataacaagctgttatggatactggccacaccctttgaagagcatgaagt
tggtaggaaatcttttcttgtggcagatcagaagaaaaatagccttcttattgaaataggcccaagtgatattattcatg
aagaggaagaggagaaagttgtcaattctcttcacgacagaatgacgcagtgtcgctatattacacctccggaaaatttt
gatctagaagcaagttctgaggaggtctttgaggtagatgttgtgggagatggaaagacagccctggaaaaagctaatat
tgaattaggtcttgcatttgatgactgggatttagattactacactaaattatttcaagaaaaaatccaaagaaatccga
caagtgttgaatgttttgaccttgctcagtccaacagtgagcatagcagacattggtttttccgaggacggctggttgtc
gatggtaaagaatacccagaatccttgtttaaaatggtgatggctacccaagaacactctaataataacaatgtcatcaa
gttctctgacaatagcagcgctattaaaggatacaatgtgaatgtgatactacccagtaatccttcagagcccagtgaga
tgaccgagatagagggcgcaaggagacatattatatttacggcagaaacacataactttcccacaggtgttgctcccttc
ccaggagccactaccggtacagggggtcgtatcagagatgtacaaagtgctgggaggggggctcatgtcgtagcggggac
tgcaggttatagctttggtaacctgaggatcccagaaggtattctgctgatagattatctccaaaaaggacaaacaatta
atggcacatactatgcttcacttctgacacagttacaggaaaatattaaacttgccgtgaaaagctcactagttaaaggt
atggaggtggctaaggtaggaggtcctgtatataggattggtgtaggaggaggtgcagcctcctctgttcaggtccaggg
agataataaggcagagcttgattttggggctgtacagagaggagatcccgagatggaacagaaactgaatagagtgatca
gggcttgtatagaaatgagggagaataatcctatagccagtatacatgaccagggagctggtggaaacggaaatgtatta
aaggagatagcagacccagcaggtgccctgatcagagcttctagctttcagcttggagacccaacacttagtgtacttga
gatatggggagccgagtatcaggagagtaacgctatactactcagtaaacagaacaaagacatagttagacgagtggcag
agagagagaggtgccctgtatgctttgtcggcaatataacaggcgatggaaggatcaaatttgaagacattgaaagagat
gagcaacaaccagatttgccatgtaaaaagaagaagaagaagaattttgagtttccagtagacttggaattggagcatgt
tctgggttcaatgccaagaaaagtatttgaaatgaagagaatgcatcctgtattaaagcccctcaccctgccggacaatc
tgttgataagagaggccctagaaagggtactgcgtctgccttctgttgctagtaaacgatatctcacaaataagactcag
gtaaatgactatgaaattgacgttatcataccaatttcacgatgtcataatgattttacatcagataccatcgaaaatga
aaaattaatctgtattccaaaaaattttataagaggtatgaaataa

Protein
Protein IDpfu_aug1.0_15057.1_68813.t1
Definition-
>pfu_aug1.0_15057.1_68813.t1
MCVVELTLEEHNKLLWILATPFEEHEVGRKSFLVADQKKNSLLIEIGPSDIIHEEEEEKVVNSLHDRMTQCRYITPPENF
DLEASSEEVFEVDVVGDGKTALEKANIELGLAFDDWDLDYYTKLFQEKIQRNPTSVECFDLAQSNSEHSRHWFFRGRLVV
DGKEYPESLFKMVMATQEHSNNNNVIKFSDNSSAIKGYNVNVILPSNPSEPSEMTEIEGARRHIIFTAETHNFPTGVAPF
PGATTGTGGRIRDVQSAGRGAHVVAGTAGYSFGNLRIPEGILLIDYLQKGQTINGTYYASLLTQLQENIKLAVKSSLVKG
MEVAKVGGPVYRIGVGGGAASSVQVQGDNKAELDFGAVQRGDPEMEQKLNRVIRACIEMRENNPIASIHDQGAGGNGNVL
KEIADPAGALIRASSFQLGDPTLSVLEIWGAEYQESNAILLSKQNKDIVRRVAERERCPVCFVGNITGDGRIKFEDIERD
EQQPDLPCKKKKKKNFEFPVDLELEHVLGSMPRKVFEMKRMHPVLKPLTLPDNLLIREALERVLRLPSVASKRYLTNKTQ
VNDYEIDVIIPISRCHNDFTSDTIENEKLICIPKNFIRGMK

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