Gene
| Gene Model ID | pfu_aug1.0_1508.1_07986 |
|---|---|
| Locus | scaffold1508.1 : 17146 ... 33778 : + |
| To GenomeBrowser | scaffold1508.1:17146..33778 |
| Genes list of scaffold | scaffold1508.1 |
| Synonym | pfu_aug2.0_480.1_00797 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1508.1_07986.t1 | 1 | 1 | adh_short | 9 | 166 | 1.6e-31 | 109.4 | 2.2e-34 | 2.3e-31 | 108.9 |
| pfu_aug1.0_1508.1_07986.t1 | 2 | 1 | Epimerase | 10 | 138 | 5.9e-09 | 35.7 | 2.1e-11 | 2.2e-08 | 33.8 |
| pfu_aug1.0_1508.1_07986.t1 | 1 | 1 | KR | 11 | 161 | 2.4e-14 | 53.3 | 3.0e-17 | 3.2e-14 | 52.9 |
| pfu_aug1.0_1508.1_07986.t1 | 1 | 1 | NAD_binding_10 | 11 | 90 | 2.7e-07 | 30.7 | 3.6e-10 | 3.8e-07 | 30.2 |
| pfu_aug1.0_1508.1_07986.t1 | 1 | 1 | adh_short_C2 | 16 | 242 | 9.8e-27 | 94.2 | 1.1e-29 | 1.2e-26 | 93.9 |
| pfu_aug1.0_1508.1_07986.t1 | 2 | 2 | Epimerase | 209 | 230 | 5.9e-09 | 35.7 | 0.44 | 470.0 | 0.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1508.1_07986.t1 | gi|260801355|ref|XP_002595561.1| | hypothetical protein BRAFLDRAFT_200527 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_1508.1_07986.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1508.1_07986.t1 atggagataagattcgacgggaaacgggcacttgttactggtgctgggaaaggaattggcagagctatagcaaagaaatt aagtgaatgtggagccgagacgatagctctcagtaggacacaagcagacttagatagtcttaaggcagagaattctaata tccatactgtgcaatgtgatctaggagactgggattcaacaaggaaagtggtagaatcacttggacgtattgatctcctg gttaacaatgctggggtttcccgactcgatacgtttctgaatttcaagaaagaagacctggactttgtctatgatataaa cataaaagcagtcatcaatgttagccaagtggtggccaagggtatggtagagagaggtaacggaggggctgttgtaaaca tatctagtacagcctccaccagggccttaactgatcacatggcgtactgctccagtaaggcagctgtggacatgatcacc aaaatcatggctttggagcttggacctcataaaatccgggttaattctgtaaatcctacagtgacatggacagacatggc acagtacgcatggagcgatccagcaaagtcaggtccaatgttagccaaaattcctatgggaaagtttgttgaggttgaag atgtggtaaattcagtcctgttcttgttgagtgacaagagtgctataaccaatggtgcccacatggtacttgatggaggt ttgagtgtggcctga |
|
Protein
| Protein ID | pfu_aug1.0_1508.1_07986.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1508.1_07986.t1 MEIRFDGKRALVTGAGKGIGRAIAKKLSECGAETIALSRTQADLDSLKAENSNIHTVQCDLGDWDSTRKVVESLGRIDLL VNNAGVSRLDTFLNFKKEDLDFVYDINIKAVINVSQVVAKGMVERGNGGAVVNISSTASTRALTDHMAYCSSKAAVDMIT KIMALELGPHKIRVNSVNPTVTWTDMAQYAWSDPAKSGPMLAKIPMGKFVEVEDVVNSVLFLLSDKSAITNGAHMVLDGG LSVA |
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