Gene
| Gene Model ID | pfu_aug1.0_15126.1_18194 |
|---|---|
| Locus | scaffold15126.1 : 2549 ... 6725 : - |
| To GenomeBrowser | scaffold15126.1:2549..6725 |
| Genes list of scaffold | scaffold15126.1 |
| Synonym | pfu_aug2.0_524.1_14253 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_15126.1_18194.t1 | 1 | 1 | PHD | 849 | 900 | 3.3e-09 | 36.2 | 1.3e-12 | 3.3e-09 | 36.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_15126.1_18194.t1 | gi|300121329|emb|CBK21709.2| | 4.0e-26 |
Transcript
| Transcript ID | pfu_aug1.0_15126.1_18194.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15126.1_18194.t1 atgcaaatcatccttagtggggatttttatcagttgccccctgtttccaatgaactgtatggagacttcggtcatcactg ttttaagcttaagtggtttaaagaaatttttccccatacaattaagttgcagaccattcataaacagacagaggcagacc tcatcaaatgtgtaaatgaatgtgctgttggggctgtatctccagatacagagaaatttataaagcgtgtatccagacct attagtcaagatgctgttcagttatttgccagaaatattgatgcggatttatataactataaaaaactgaatcaggaacc aggcgaactcaaagtttatgactccattgatgaaggatcagcacactatttaggtaaattcttggcaccaagacatttag gactgaaaaaaggttgctctgtcattttgttgaaaaatctgaacaacttacttgtcaatggtctgcaggggacagtaaat gaaatgaaacaaaattcagtggatgtaacatttttcatcaataaacctttgacagttaacatcacattctctacattcac aaccattgatccagttgacaaaactgttcttgctaaacgtgtacaaataccattaagtctaggatatgcaattaccatcc ataaatcccaagggatgactttaaggtctgtagtggtgaactgtgagaactgcattaatcctggtcaagttggtgtaggg atttgtcgagctgtatcatctgatggactgtgcgtgttaaacttcaagaagtccctctgtaaggagcacccacaccctgt aaaagaattttatgataatgtaagtgtaggaaacactaatgaagacttgtcttgctgtaggacaaagaaagcttcacaag acatggaaggtgatgatgatgatgatgatgatgatgatgatgcaaaaggtgatgacaaaagaactcgagatgaacactta tcacaatacattgattctgattactcggatgatgatttggaatacattgaaatcattgattcaaacttttcagattcaga tttaggtgaccaagaacatagaacttttgattttgaggccaggaaagcactagaagagtgtatgacggattttatagata cacctgcagaggataacatgaaaaagtttaaagacttaattgaagccaatcacacaccttttcaggatttttacagcacc cagaatactcacatgaagaattttcttaatcaagccttcccaccaaatgtaacttattcgaacaaaaatacaaatgaatt tttcaaattatttcaacattatatgtccagtcaggagtataaacaatcagctgagtccctattatccttgtataaagttc ctacaaatggtccagaatttcagcttttaagttgtgtcctgttttacatagagaagaagaacttactaagtattcatgag aaattagagcttgatgtacatgtaccacattcaaagagatttggggatgaacatgtgatgtcacctgggggtagagggaa agttagatatattgcaggatatgtagtagcaaaagtgaggtaccgtatttcgaagaacttgagaaatgccctttttgcga aaggcaaagaggaaactgtaaaaaagcttcaggcaaatatcaaaatgttaaatttcctgtgtatttcttattatgaagaa atctcacattctaccgaagacagtgagagtttacaagaaacagcaaggaaacaaaataacagggaaggattgacaaatgt aacagacaaaacattcaactttttcatgcacttggagaaagtttgtcgagaaaatctttcaaacgagtatgtattagagt atggcaaacatgtgttcagctttgtgatgtccaaaataaagaaagatcttcatttttttgaaatgtgggtggatctgttc agcagcagtaccatttattttgaagagcagtctaatgatgaaagttctacaggtcatgatgatgaaacagtgaatgtagt gataaaagatattgtgaatcagtgcgaaaatacatctgatttgtttgaatctgctgtttcgctttttgtgaaagtgaact gtagccaatttagaagagattacctatccacactcaggagagaaaagataaaagctcttagaaagaaagtagtcaacaag tctaagagagtttcagaaactgtgaatatgaaatttatactgaaagatttatcacacagtaaacatgtttcacatctgcg acttaaggctgaagtaacacagaatcctcaatatctgacttttaagttatttacgaaaaaagatttatttgtgttgtgta aggcatatggtctgaaaatgtcccttcacaagaaaaaagaagaaatatgtatgacattaaaagacaaaattttgaatagc agttgcataccatatcctgatgagatatctacagctggtagtggattatctgtagagtctgtccctagtgcctcagcagc cttgccttctccttcttcttcttccgcgagtgcagtactgacttctgaaacattaagtgacacatgtaatatatgtcaga gggaggatacagatcatgaatggatctcctgcgataaatgtgatagttggttacatagaaagtgtgctggaattaatgat gaaactgaatggatcagactcacagaggagggtgtacctttcatatgcaagaactgtcagtcttaa |
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Protein
| Protein ID | pfu_aug1.0_15126.1_18194.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15126.1_18194.t1 MQIILSGDFYQLPPVSNELYGDFGHHCFKLKWFKEIFPHTIKLQTIHKQTEADLIKCVNECAVGAVSPDTEKFIKRVSRP ISQDAVQLFARNIDADLYNYKKLNQEPGELKVYDSIDEGSAHYLGKFLAPRHLGLKKGCSVILLKNLNNLLVNGLQGTVN EMKQNSVDVTFFINKPLTVNITFSTFTTIDPVDKTVLAKRVQIPLSLGYAITIHKSQGMTLRSVVVNCENCINPGQVGVG ICRAVSSDGLCVLNFKKSLCKEHPHPVKEFYDNVSVGNTNEDLSCCRTKKASQDMEGDDDDDDDDDDAKGDDKRTRDEHL SQYIDSDYSDDDLEYIEIIDSNFSDSDLGDQEHRTFDFEARKALEECMTDFIDTPAEDNMKKFKDLIEANHTPFQDFYST QNTHMKNFLNQAFPPNVTYSNKNTNEFFKLFQHYMSSQEYKQSAESLLSLYKVPTNGPEFQLLSCVLFYIEKKNLLSIHE KLELDVHVPHSKRFGDEHVMSPGGRGKVRYIAGYVVAKVRYRISKNLRNALFAKGKEETVKKLQANIKMLNFLCISYYEE ISHSTEDSESLQETARKQNNREGLTNVTDKTFNFFMHLEKVCRENLSNEYVLEYGKHVFSFVMSKIKKDLHFFEMWVDLF SSSTIYFEEQSNDESSTGHDDETVNVVIKDIVNQCENTSDLFESAVSLFVKVNCSQFRRDYLSTLRREKIKALRKKVVNK SKRVSETVNMKFILKDLSHSKHVSHLRLKAEVTQNPQYLTFKLFTKKDLFVLCKAYGLKMSLHKKKEEICMTLKDKILNS SCIPYPDEISTAGSGLSVESVPSASAALPSPSSSSASAVLTSETLSDTCNICQREDTDHEWISCDKCDSWLHRKCAGIND ETEWIRLTEEGVPFICKNCQS |
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