Gene
| Gene Model ID | pfu_aug1.0_15148.1_32515 |
|---|---|
| Locus | scaffold15148.1 : 18915 ... 24945 : - |
| To GenomeBrowser | scaffold15148.1:18915..24945 |
| Genes list of scaffold | scaffold15148.1 |
| Synonym | pfu_aug2.0_5045.1_19386 |
Manual annotation
| Study field | other developmental genes |
|---|---|
| Gene name | Tbx20 |
| Description | BLAST hits and simple NJ tree shows an affinity to Tbx20. |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_15148.1_32515.t1 | 1 | 1 | T-box | 1 | 40 | 2.3e-06 | 27.1 | 2.2e-10 | 3.2e-06 | 26.7 |
Transcript
| Transcript ID | pfu_aug1.0_15148.1_32515.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15148.1_32515.t1 atgttccctgctatacgggtaaagttacatggattaaaaagtgatgccaaatataaagtatggatagaatttttacaatt ggatcaacagaaatacagatacgtctatcatagaagttcctttgaagcgatgattgaatcctacggatatccaatgaaca aatctgaagacactacaaacagcattatacaaaggggagtcaaacggcgacattctgacgaagattttgaagaagaaagt cccatgtttacagacagtgttcgtgttagttacatagacagaccacataacttcttataccacatcggaacagttccagt gcggcttactcagaacacaaacttagtacgagtcaagtgtccgtcacagcagcacaagtccatcttacctgatgtgaagc ctacagtggagaggaacgcataccaagactttctctcggcgtgtcaaagcaaactcatctccactttctatcctcactga |
|
Protein
| Protein ID | pfu_aug1.0_15148.1_32515.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15148.1_32515.t1 MFPAIRVKLHGLKSDAKYKVWIEFLQLDQQKYRYVYHRSSFEAMIESYGYPMNKSEDTTNSIIQRGVKRRHSDEDFEEES PMFTDSVRVSYIDRPHNFLYHIGTVPVRLTQNTNLVRVKCPSQQHKSILPDVKPTVERNAYQDFLSACQSKLISTFYPH |
|