Gene
Gene Model ID | pfu_aug1.0_15148.1_32515 |
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Locus | scaffold15148.1 : 18915 ... 24945 : - |
To GenomeBrowser | scaffold15148.1:18915..24945 |
Genes list of scaffold | scaffold15148.1 |
Synonym | pfu_aug2.0_5045.1_19386 |
Manual annotation
Study field | other developmental genes |
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Gene name | Tbx20 |
Description | BLAST hits and simple NJ tree shows an affinity to Tbx20. |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_15148.1_32515.t1 | 1 | 1 | T-box | 1 | 40 | 2.3e-06 | 27.1 | 2.2e-10 | 3.2e-06 | 26.7 |
Transcript
Transcript ID | pfu_aug1.0_15148.1_32515.t1 |
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Definition | - |
>pfu_aug1.0_15148.1_32515.t1 atgttccctgctatacgggtaaagttacatggattaaaaagtgatgccaaatataaagtatggatagaatttttacaatt ggatcaacagaaatacagatacgtctatcatagaagttcctttgaagcgatgattgaatcctacggatatccaatgaaca aatctgaagacactacaaacagcattatacaaaggggagtcaaacggcgacattctgacgaagattttgaagaagaaagt cccatgtttacagacagtgttcgtgttagttacatagacagaccacataacttcttataccacatcggaacagttccagt gcggcttactcagaacacaaacttagtacgagtcaagtgtccgtcacagcagcacaagtccatcttacctgatgtgaagc ctacagtggagaggaacgcataccaagactttctctcggcgtgtcaaagcaaactcatctccactttctatcctcactga |
Protein
Protein ID | pfu_aug1.0_15148.1_32515.t1 |
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Definition | - |
>pfu_aug1.0_15148.1_32515.t1 MFPAIRVKLHGLKSDAKYKVWIEFLQLDQQKYRYVYHRSSFEAMIESYGYPMNKSEDTTNSIIQRGVKRRHSDEDFEEES PMFTDSVRVSYIDRPHNFLYHIGTVPVRLTQNTNLVRVKCPSQQHKSILPDVKPTVERNAYQDFLSACQSKLISTFYPH |