Gene
| Gene Model ID | pfu_aug1.0_15156.1_46843 |
|---|---|
| Locus | scaffold15156.1 : 45 ... 1124 : + |
| To GenomeBrowser | scaffold15156.1:45..1124 |
| Genes list of scaffold | scaffold15156.1 |
| Synonym | NA |
Manual annotation
| Study field | Metabolism |
|---|---|
| Gene name | RPE65 superfamily |
| Description | Highest BLAST hit to NP_820017.1lignostilbene-alpha,beta-dioxygenase [Coxiella burnetii RSA 493] |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_15156.1_46843.t1 | 1 | 1 | RPE65 | 2 | 205 | 9.80909e-45 | 152.9 | 0.0 | 1.12104e-44 | 152.8 |
Transcript
| Transcript ID | pfu_aug1.0_15156.1_46843.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15156.1_46843.t1 atgaaaaccgaaaacatgtttacaatgcaccatataaatgcatttgaatcggggaagagggaaattaccgtcgacgtttc gtcgtacccaagtccgcaatttgtcaaagacttacaaatgaaaatacttttagatccaatcgaaaggaacaattttgacg cgcatgcgttactaaaaaggtatcacatcgacatcgatagaaaggaagtaacggctgcgtcatttccggtgtcaaagaca gttccgtttgctaacaaactagacatgccgacaataaacgaaaattaccgataccaaaattattgttatatatatggcgt tgttctgaaaagtgacgataccaatttaagtcacatttcattggttaaaaaagatatttgtaacgcatcgggtgataagt catggttcattaaacaccattacccagtggaggcgtggtttgtgggagcaccatcagccaaagaagaggatgatgggtat ttattagtaccaatattggatgggaagaataagactagctacttgtccatcatagatgcaaaaacgatgaaaactataaa tcgggcggagctgcctacaataatcccattcaatctacatggacgatttttcgaggacgtggtttga |
|
Protein
| Protein ID | pfu_aug1.0_15156.1_46843.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15156.1_46843.t1 MKTENMFTMHHINAFESGKREITVDVSSYPSPQFVKDLQMKILLDPIERNNFDAHALLKRYHIDIDRKEVTAASFPVSKT VPFANKLDMPTINENYRYQNYCYIYGVVLKSDDTNLSHISLVKKDICNASGDKSWFIKHHYPVEAWFVGAPSAKEEDDGY LLVPILDGKNKTSYLSIIDAKTMKTINRAELPTIIPFNLHGRFFEDVV |
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