Gene
Gene Model ID | pfu_aug1.0_15156.1_46843 |
---|---|
Locus | scaffold15156.1 : 45 ... 1124 : + |
To GenomeBrowser | scaffold15156.1:45..1124 |
Genes list of scaffold | scaffold15156.1 |
Synonym | NA |
Manual annotation
Study field | Metabolism |
---|---|
Gene name | RPE65 superfamily |
Description | Highest BLAST hit to NP_820017.1lignostilbene-alpha,beta-dioxygenase [Coxiella burnetii RSA 493] |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_15156.1_46843.t1 | 1 | 1 | RPE65 | 2 | 205 | 9.80909e-45 | 152.9 | 0.0 | 1.12104e-44 | 152.8 |
Transcript
Transcript ID | pfu_aug1.0_15156.1_46843.t1 |
---|---|
Definition | - |
>pfu_aug1.0_15156.1_46843.t1 atgaaaaccgaaaacatgtttacaatgcaccatataaatgcatttgaatcggggaagagggaaattaccgtcgacgtttc gtcgtacccaagtccgcaatttgtcaaagacttacaaatgaaaatacttttagatccaatcgaaaggaacaattttgacg cgcatgcgttactaaaaaggtatcacatcgacatcgatagaaaggaagtaacggctgcgtcatttccggtgtcaaagaca gttccgtttgctaacaaactagacatgccgacaataaacgaaaattaccgataccaaaattattgttatatatatggcgt tgttctgaaaagtgacgataccaatttaagtcacatttcattggttaaaaaagatatttgtaacgcatcgggtgataagt catggttcattaaacaccattacccagtggaggcgtggtttgtgggagcaccatcagccaaagaagaggatgatgggtat ttattagtaccaatattggatgggaagaataagactagctacttgtccatcatagatgcaaaaacgatgaaaactataaa tcgggcggagctgcctacaataatcccattcaatctacatggacgatttttcgaggacgtggtttga |
Protein
Protein ID | pfu_aug1.0_15156.1_46843.t1 |
---|---|
Definition | - |
>pfu_aug1.0_15156.1_46843.t1 MKTENMFTMHHINAFESGKREITVDVSSYPSPQFVKDLQMKILLDPIERNNFDAHALLKRYHIDIDRKEVTAASFPVSKT VPFANKLDMPTINENYRYQNYCYIYGVVLKSDDTNLSHISLVKKDICNASGDKSWFIKHHYPVEAWFVGAPSAKEEDDGY LLVPILDGKNKTSYLSIIDAKTMKTINRAELPTIIPFNLHGRFFEDVV |