Gene
| Gene Model ID | pfu_aug1.0_15156.1_46844 |
|---|---|
| Locus | scaffold15156.1 : 3072 ... 12412 : - |
| To GenomeBrowser | scaffold15156.1:3072..12412 |
| Genes list of scaffold | scaffold15156.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_15156.1_46844.t1 | 4 | 1 | zf-NF-X1 | 18 | 24 | 2.0e-06 | 27.6 | 0.013 | 190.0 | 2.1 |
| pfu_aug1.0_15156.1_46844.t1 | 4 | 2 | zf-NF-X1 | 30 | 47 | 2.0e-06 | 27.6 | 1.4e-10 | 2.0e-06 | 27.6 |
| pfu_aug1.0_15156.1_46844.t1 | 4 | 3 | zf-NF-X1 | 55 | 60 | 2.0e-06 | 27.6 | 0.089 | 1300.0 | -0.6 |
| pfu_aug1.0_15156.1_46844.t1 | 4 | 4 | zf-NF-X1 | 69 | 78 | 2.0e-06 | 27.6 | 0.44 | 6500.0 | -2.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_15156.1_46844.t1 | gi|221132255|ref|XP_002157347.1| | 3.0e-21 |
Transcript
| Transcript ID | pfu_aug1.0_15156.1_46844.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15156.1_46844.t1 atggtggtccgtgtgaaccgtgtgctgaagtcatcgtacaaaaaagatgagcatccttgcgaccttatttgtgggaagaa gttgagttgtggccttcacaaatgtgacgagccttgtcaccgtggtaactgtccaccatgtttaatggcaggttttgacg aggtgacatgtcactgtggtagtgagattatgtatcctccaataccatgtggtgccaagccgcccgagtgtaaaaaaggt gtacacgacaacactcatgtgaccatccaggtaagtgtaaaaaaccgtgtacacaacaacactcatgtgaccatccagtt cgccgggatgaaaaattccggagagctaatgccataccctcggcgtcgttgtcgtcggcggcgtcgtcgtccgtag |
|
Protein
| Protein ID | pfu_aug1.0_15156.1_46844.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15156.1_46844.t1 MVVRVNRVLKSSYKKDEHPCDLICGKKLSCGLHKCDEPCHRGNCPPCLMAGFDEVTCHCGSEIMYPPIPCGAKPPECKKG VHDNTHVTIQVSVKNRVHNNTHVTIQFAGMKNSGELMPYPRRRCRRRRRRP |
|