Gene
| Gene Model ID | pfu_aug1.0_1516.1_22619 |
|---|---|
| Locus | scaffold1516.1 : 19336 ... 30878 : + |
| To GenomeBrowser | scaffold1516.1:19336..30878 |
| Genes list of scaffold | scaffold1516.1 |
| Synonym | pfu_aug2.0_96.1_20220 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1516.1_22619.t1 | 1 | 1 | VIT | 15 | 130 | 3.5e-39 | 133.1 | 4.30058e-42 | 9.0e-39 | 131.8 |
| pfu_aug1.0_1516.1_22619.t1 | 1 | 1 | VWA | 261 | 431 | 7.1e-22 | 77.9 | 6.7e-25 | 1.4e-21 | 76.9 |
| pfu_aug1.0_1516.1_22619.t1 | 1 | 1 | VWA_2 | 261 | 418 | 5.2e-21 | 75.4 | 4.2e-24 | 8.9e-21 | 74.7 |
| pfu_aug1.0_1516.1_22619.t1 | 1 | 1 | VWA_3 | 261 | 418 | 1.1e-18 | 67.4 | 1.0e-21 | 2.1e-18 | 66.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1516.1_22619.t1 | gi|348544635|ref|XP_003459786.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
| mantle | 1 |
| mantlePallium | 2 |
Transcript
| Transcript ID | pfu_aug1.0_1516.1_22619.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1516.1_22619.t1 atgatagtcaaacgcaaaacccgatatcagacttcaaagactccaaagatatattccctccatatccggtcagatataac ataccgcttttccaacactctggtcacaagtaaagtggcgaatccggacacagtcagcagggaggccaagtttgacgtta cgctccctaacgaggctttcatcacaaaattcaaattgattattaacaacaaaacgtatgatggggaggttaaagaaaaa gaagaagccaagcaacaatatgaagaagccaaagatagaggacaaagtgccggacagattgtagcaaagccgagggagac gaatatgtttgaaattatggtcaatgtcgccgctcaagaaaaagtaatttttgagttgacctaccaggaattactgcgca ggaaaaagggacgctacagtcacatgacatatataaatccaggacaattagttaatgatttcctcatcgaggtgaagatt aacgaatcacgtgccttgtccgagcttgaaattcccgccattcgtaacgatatattgacagacgatgacactgaggatga taacgaattagctgtgattgagcgaccatcaccaaagtctgccttaattacatacagaccaactattgaccaacaaagac aagaatctgagaggggcatcaggggacagtttgttgtggaatatgatatagaaagagaaaacgtagcgggagagctattg gtggtcaatggatactttgttcactattttgcccctgatgaattacctcccctgcctatggatatcgtctttattttgga taaaagcggatccatgaatggaagaaagattgtacagttaaaggaagccatgaacagaatttttagtgacatgcgcacag atgacagatttacaataatgacttttgatggaagtatccgcctctggaagaatacacttgtttcagtgacggaccaaact ctgctggaagccaaagacttcgtggacaaaatcccagctaggggctcaaccaatatcaacgatgccctcgtacgaggtat agacttactttctggtatgccggagtcatccaggtcacctgttataatatttctgactgacggggaaccaacgactggag tgaccaaccctactcaaattctatccaatgtccgctccaagaacgaaattgaagtaccaattttcagtcttgctttcgga agcggagcggattatcagttcacaaaaaaactggcggcacagaataacggtatggggaggaagatttatgaagattccga ctcttcattacagataacaggattcatagaagaaatatcaactattcttctgaagaatgttactttcaagtatctcaatg acaaagtcaatcaaacgactctgacaaagacaaattacaacacagtatttggtggcaccgaggtgataatcagtggtaga ctagcagatcaaacatcgcaaagtcttagtacaaatgatcttccactaagaattacaggcatgggcaaagcccggccttt tatttgcacgactcctcctcatccaatagtgattttcaaaaacaacagctccaatgccacatccaccggcggttacttct cccagctaactgagaaactttgggcatatcttactattaagcagatgtttcgaaataaagaggcaatgacgggtgaagca gaaaaacaaaaacttaatgacaagattttacaattgtctctaaagtataagtttgtcacccctctaacctctatggtggt cacgatgccggacgagttgaaagctacaccacgtttggttgacgatgacgtcgtcgctacagagagtctcccacatgtta gtttaagctccattagttcagcaggaatgtccggctcaagtcgcagggttgcttacttcatgccaccacatgcatctggt atgggtggtagggttttctctcaaatgccaccccagaggccctcgttcgatcttatgtcacttccttctttccaacctat gaaaaggaattttataaccccgcttaaaacaaacataaaaaggaagatattacgtagacctcctgtgaagaaaacaacaa caagaacaacaacaacaacaacaacacagaaaccgtccaagtctgttcaacaacctagaagatctaaaaagagtaagttt gccagcttccttatcgagattcaaggtctgacgtcaccgctctgtatgaatttggatatgaagcccggaaatttcacttt catgaaaactcttataggagatgaggagatacttgtacaagctgggcttaccagacgtcgtgtgacacctataatgcgtg tcatccttacaaaacagacgttaagacaagacctttctgcagaccccacccttggtgatggagcccaaatctttgcgatt agtagtaacaacataaagatgaatgtcacacagagtattgagaggtcctctggccgcttacagctttacactcacattcc agttactgcccctgatgatttagatggtgtgataggtaagatgattaacataatcggtcactga |
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Protein
| Protein ID | pfu_aug1.0_1516.1_22619.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1516.1_22619.t1 MIVKRKTRYQTSKTPKIYSLHIRSDITYRFSNTLVTSKVANPDTVSREAKFDVTLPNEAFITKFKLIINNKTYDGEVKEK EEAKQQYEEAKDRGQSAGQIVAKPRETNMFEIMVNVAAQEKVIFELTYQELLRRKKGRYSHMTYINPGQLVNDFLIEVKI NESRALSELEIPAIRNDILTDDDTEDDNELAVIERPSPKSALITYRPTIDQQRQESERGIRGQFVVEYDIERENVAGELL VVNGYFVHYFAPDELPPLPMDIVFILDKSGSMNGRKIVQLKEAMNRIFSDMRTDDRFTIMTFDGSIRLWKNTLVSVTDQT LLEAKDFVDKIPARGSTNINDALVRGIDLLSGMPESSRSPVIIFLTDGEPTTGVTNPTQILSNVRSKNEIEVPIFSLAFG SGADYQFTKKLAAQNNGMGRKIYEDSDSSLQITGFIEEISTILLKNVTFKYLNDKVNQTTLTKTNYNTVFGGTEVIISGR LADQTSQSLSTNDLPLRITGMGKARPFICTTPPHPIVIFKNNSSNATSTGGYFSQLTEKLWAYLTIKQMFRNKEAMTGEA EKQKLNDKILQLSLKYKFVTPLTSMVVTMPDELKATPRLVDDDVVATESLPHVSLSSISSAGMSGSSRRVAYFMPPHASG MGGRVFSQMPPQRPSFDLMSLPSFQPMKRNFITPLKTNIKRKILRRPPVKKTTTRTTTTTTTQKPSKSVQQPRRSKKSKF ASFLIEIQGLTSPLCMNLDMKPGNFTFMKTLIGDEEILVQAGLTRRRVTPIMRVILTKQTLRQDLSADPTLGDGAQIFAI SSNNIKMNVTQSIERSSGRLQLYTHIPVTAPDDLDGVIGKMINIIGH |
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