Gene
| Gene Model ID | pfu_aug1.0_1516.1_22620 |
|---|---|
| Locus | scaffold1516.1 : 37546 ... 49637 : + |
| To GenomeBrowser | scaffold1516.1:37546..49637 |
| Genes list of scaffold | scaffold1516.1 |
| Synonym | pfu_aug2.0_96.1_20221 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1516.1_22620.t1 | 2 | 1 | VWA | 56 | 145 | 8.0e-13 | 48.4 | 1.3e-15 | 3.9e-12 | 46.2 |
| pfu_aug1.0_1516.1_22620.t1 | 1 | 1 | VWA_3 | 56 | 147 | 5.2e-12 | 45.7 | 3.1e-15 | 9.2e-12 | 44.9 |
| pfu_aug1.0_1516.1_22620.t1 | 1 | 1 | VWA_2 | 56 | 146 | 6.5e-10 | 39.3 | 4.8e-13 | 1.4e-09 | 38.2 |
| pfu_aug1.0_1516.1_22620.t1 | 2 | 2 | VWA | 512 | 545 | 8.0e-13 | 48.4 | 0.36 | 1100.0 | -0.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1516.1_22620.t1 | gi|344238972|gb|EGV95075.1| | Inter-alpha-trypsin inhibitor heavy chain H2 [Cricetulus griseus] | 2.0e-30 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantleEdge | 1 |
| mantlePallium | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1516.1_22620.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1516.1_22620.t1 atggtgattatagttcctaagatacattccctccatatccggtcagacatcacataccgcttttctaccactgtggtcac tagtaaagtagtcaatccggatacggtggtcaacggatattttgttcactattttgcccctgataaattacctccccttc ctatggatattgtcttcattttggataaaagtggatccatgagcggaaggaagatagtgcaattaaaggaagccatgaag aaaattcttagtgacatgcgcactgatgacagatttactataatgacttttgacggaataatccgtttttggaagaattc gcttgtctcagcgacgaaacaaactttattggaagccaaagacttcgtggccaaaatccaagctaggggctcaaccaata tcaacgatgccctcatgcgtggtctacgcttattgtctggattcattgaagagatttccacagttcttctgaagaatgta acattcaagtatctcaatgacaaagtcaaccaaacaacactaacaaagacaaattacaacacagtatttggtggcagcga gattgacagagacatcaacgttaccaaagacgtatcaataggcggttatttctctaaaataacggagaaattatgggcct acctaactgtcaaacagatgttacgtaaacttgatgcacttacggataaagatgagaaacaaaaagtgaatgacaggatt ctacaattgtcaataaagtatgatttcgtgactccactgacttcgatggtagtcactatgccggatgagctaaaggctaa gccacgattggtcgaaggttcagcaggaatgccaggaccacccgtacagtttagcatgcacaagccggcacgttggttag cacctggatcgtttcattcaggtccattcctatctcctgcgacaaggtaccagacaaccacggcaggattgtttacaata acaaaaccaataacaattccaacaacaacaatgccaacaacaacaacaatgccaacaacaacaacaatgccaacaacgat aactactactactacaatgccaacaactactacaacacagaaacctgccacgactcatcaacaagccagcagttctaaga ttacgttcgtcagtatagtcgtgaagattcctggcattatatcacctttatgtatgaacttgccaccaggaaagttcatt ttattccaaacaaccaagggagatgagaaaattatcgtacacgctggacctacgaaagacggtgtaactccagtggtacg agtcatccatacaaaaccaggagcaataagagaggaagtgttcccaaaaccaaggttgggcaatgcaacaactcttatgc agatccgcaataacaacataaatacggaagttatacagatcgtggaaaactcatacagcaggctccagctatacattaaa ctaccatcctccaccccggatgatatagatggcattctgagagtcttcaaaggaatgaccggacggagagaacttcaggg taaaacaaaaaatgggaacctgatggcaaaactacaacttaggaaaaaaggatccgtggatatagaagtgagtgctattg gagctagaatggaagttttcactccaatgtgctggattgtgaacaacaatctaatgaaaaatttgaatttattgaaatac cagttataa |
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Protein
| Protein ID | pfu_aug1.0_1516.1_22620.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1516.1_22620.t1 MVIIVPKIHSLHIRSDITYRFSTTVVTSKVVNPDTVVNGYFVHYFAPDKLPPLPMDIVFILDKSGSMSGRKIVQLKEAMK KILSDMRTDDRFTIMTFDGIIRFWKNSLVSATKQTLLEAKDFVAKIQARGSTNINDALMRGLRLLSGFIEEISTVLLKNV TFKYLNDKVNQTTLTKTNYNTVFGGSEIDRDINVTKDVSIGGYFSKITEKLWAYLTVKQMLRKLDALTDKDEKQKVNDRI LQLSIKYDFVTPLTSMVVTMPDELKAKPRLVEGSAGMPGPPVQFSMHKPARWLAPGSFHSGPFLSPATRYQTTTAGLFTI TKPITIPTTTMPTTTTMPTTTTMPTTITTTTTMPTTTTTQKPATTHQQASSSKITFVSIVVKIPGIISPLCMNLPPGKFI LFQTTKGDEKIIVHAGPTKDGVTPVVRVIHTKPGAIREEVFPKPRLGNATTLMQIRNNNINTEVIQIVENSYSRLQLYIK LPSSTPDDIDGILRVFKGMTGRRELQGKTKNGNLMAKLQLRKKGSVDIEVSAIGARMEVFTPMCWIVNNNLMKNLNLLKY QL |
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