Gene
| Gene Model ID | pfu_aug1.0_1516.1_22621 |
|---|---|
| Locus | scaffold1516.1 : 53576 ... 66046 : + |
| To GenomeBrowser | scaffold1516.1:53576..66046 |
| Genes list of scaffold | scaffold1516.1 |
| Synonym | pfu_aug2.0_96.1_20222 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1516.1_22621.t1 | 1 | 1 | VIT | 36 | 146 | 6.2e-35 | 119.4 | 6.5e-38 | 1.4e-34 | 118.3 |
| pfu_aug1.0_1516.1_22621.t1 | 1 | 1 | VWA | 271 | 441 | 5.8e-20 | 71.7 | 2.7e-23 | 5.8e-20 | 71.7 |
| pfu_aug1.0_1516.1_22621.t1 | 1 | 1 | VWA_2 | 271 | 428 | 1.4e-19 | 70.8 | 1.3e-22 | 2.7e-19 | 69.9 |
| pfu_aug1.0_1516.1_22621.t1 | 1 | 1 | VWA_3 | 271 | 428 | 3.2e-19 | 69.1 | 2.7e-22 | 5.6e-19 | 68.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1516.1_22621.t1 | gi|345806502|ref|XP_548489.3| | PREDICTED: LOW QUALITY PROTEIN: inter-alpha-trypsin inhibitor heavy chain H3 [Canis lupus familiaris] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_1516.1_22621.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1516.1_22621.t1 atggctgccgagggctctgattggcttacgcactttcgacttctcctctgcaaccgctgcaccgaatttcataaaacctt acagacagttcctaatacacatttcctccatatccggtcagacattacataccgcttttccaccactctggtcactagta aagtagccaatccggacacggtcagcagggaggcaaagtttgacgtcacaatcccgaacgaggctttcatcacaaaattc aaactgacactgagcaacgaaacttacgatggcgaggtaaaagaaaaagaagaagccaagaaacaatatgaagcagccaa agatagaggacagagtgccggacatattgtagtaaagcctagagagacaaacatgttccaaatcatggtcaatatcgctg cccaggaaaatgttacgtttgagttaacatatcaggaattactgcgtcggaagaaaggacgatatagtcacgtgacatac atagatccaggacaattggttgatgatttgttgatcgaggtttcaatcaatgaatcacgtgacttgtctatgctcaaagt tcctgctattcggaacgacatattaaacaatgataacactgaagatgataacgaactagctgtgattgagcgaccatcac caaagtctgccttagttacatacaggccaactattgaccaacaacgacaggaatccgataggggcgtcaggggacagttt gttgtggaatatgatatagaaagagaaaatgtagtcaatgggtattttgttcattattttgcccctgatgaattgcctcc ccttcctatggatattgtcttcattttggataaaagtggatcaatgagtggaagaaagatgctgcagttgaaaggcgcca tgaagaaaatacttagtgacatgcgcactgatgacaaatttacaattatgacttttgacggaagcattagcttctggaag gacacactcgtctcggtgacggaccaaactttgctggaagccaaagactttgtagacaaaatccacgctactggatcaac caatatcaacgatgctatcgaacgaggtatagatttactttcccgtatcccggagacatcaagagcaccggttataatat ttctgactgacggggaaccaacgactggacagacaaatccaacacggattctctcaaatatccgctcaaagaacgaaatg gaggttcccattttcagcctggctttcggacgaggagcagattatcaattcacaaagaaggttgcagcacaaaacaacgg tctggggaggaagatttatgaagattccgactcttcactacagataacaggattcattgaagaaatttccactattcttt tgaagaatgtaacattcaaatatctcaatgacaaagtcaaccaaacaacacttacacagacaactttcagtacagtattt ggtggcagcgaggtgataatcagtggtagacttgcagaccaaaaatcacgaagtttaagtacaaatgatcttcctctgaa aataacggggaccggtagaaatgagcctttcatctgtatatatccccttcctctcataaagattgacagagacatcaatg ttaccaaagaagtatcaacaggtggttatttctctacgataacggagaaactgtgggcctacctaactgtcaaacagatg ttacgtaaacttgatgcacttacggataaagatgagaaacaaaaagtgaaggacaggattctacaattgtcattaaaggt atcagacaaaaacatcagcggtgacaacaacgacgacgacgacaccaccaccaccaacaacaacaacagcaacaacaaca acaacgacgacgacgacgacagcaccaccaccaacaacaacacagaaacctacagggcatcttcagcaacgttacacact gccatcgtctacccatatgatatgtatggtccgtcgatgctcaatttggtgccctattgtgagtgccttcgagattatcg tcaggatcttctttaa |
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Protein
| Protein ID | pfu_aug1.0_1516.1_22621.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1516.1_22621.t1 MAAEGSDWLTHFRLLLCNRCTEFHKTLQTVPNTHFLHIRSDITYRFSTTLVTSKVANPDTVSREAKFDVTIPNEAFITKF KLTLSNETYDGEVKEKEEAKKQYEAAKDRGQSAGHIVVKPRETNMFQIMVNIAAQENVTFELTYQELLRRKKGRYSHVTY IDPGQLVDDLLIEVSINESRDLSMLKVPAIRNDILNNDNTEDDNELAVIERPSPKSALVTYRPTIDQQRQESDRGVRGQF VVEYDIERENVVNGYFVHYFAPDELPPLPMDIVFILDKSGSMSGRKMLQLKGAMKKILSDMRTDDKFTIMTFDGSISFWK DTLVSVTDQTLLEAKDFVDKIHATGSTNINDAIERGIDLLSRIPETSRAPVIIFLTDGEPTTGQTNPTRILSNIRSKNEM EVPIFSLAFGRGADYQFTKKVAAQNNGLGRKIYEDSDSSLQITGFIEEISTILLKNVTFKYLNDKVNQTTLTQTTFSTVF GGSEVIISGRLADQKSRSLSTNDLPLKITGTGRNEPFICIYPLPLIKIDRDINVTKEVSTGGYFSTITEKLWAYLTVKQM LRKLDALTDKDEKQKVKDRILQLSLKVSDKNISGDNNDDDDTTTTNNNNSNNNNNDDDDDSTTTNNNTETYRASSATLHT AIVYPYDMYGPSMLNLVPYCECLRDYRQDLL |
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