Gene
| Gene Model ID | pfu_aug1.0_15162.1_61461 |
|---|---|
| Locus | scaffold15162.1 : 931 ... 16828 : - |
| To GenomeBrowser | scaffold15162.1:931..16828 |
| Genes list of scaffold | scaffold15162.1 |
| Synonym | pfu_aug2.0_59.1_30096 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_15162.1_61461.t1 | 3 | 1 | CLASP_N | 30 | 55 | 1.4e-07 | 31.0 | 1.1e-05 | 0.015 | 14.6 |
| pfu_aug1.0_15162.1_61461.t1 | 2 | 1 | Adaptin_N | 31 | 128 | 2.2e-07 | 29.5 | 0.00027 | 0.37 | 9.0 |
| pfu_aug1.0_15162.1_61461.t1 | 4 | 1 | HEAT_2 | 32 | 94 | 4.9e-21 | 74.8 | 2.2e-05 | 0.03 | 14.6 |
| pfu_aug1.0_15162.1_61461.t1 | 3 | 1 | Vac14_Fab1_bd | 32 | 92 | 1.4e-07 | 31.7 | 8.6e-05 | 0.12 | 12.8 |
| pfu_aug1.0_15162.1_61461.t1 | 4 | 2 | HEAT_2 | 34 | 127 | 4.9e-21 | 74.8 | 5.4e-06 | 0.0073 | 16.5 |
| pfu_aug1.0_15162.1_61461.t1 | 4 | 1 | HEAT | 34 | 54 | 5.2e-16 | 57.2 | 0.00014 | 0.19 | 11.8 |
| pfu_aug1.0_15162.1_61461.t1 | 4 | 1 | Arm | 34 | 54 | 8.2e-10 | 38.1 | 0.15 | 200.0 | 2.0 |
| pfu_aug1.0_15162.1_61461.t1 | 4 | 1 | HEAT_EZ | 34 | 54 | 1.9e-08 | 34.5 | 0.071 | 96.0 | 3.6 |
| pfu_aug1.0_15162.1_61461.t1 | 4 | 2 | HEAT_EZ | 58 | 91 | 1.9e-08 | 34.5 | 0.35 | 470.0 | 1.4 |
| pfu_aug1.0_15162.1_61461.t1 | 3 | 2 | CLASP_N | 72 | 171 | 1.4e-07 | 31.0 | 0.00048 | 0.64 | 9.3 |
| pfu_aug1.0_15162.1_61461.t1 | 4 | 2 | HEAT | 73 | 99 | 5.2e-16 | 57.2 | 0.22 | 300.0 | 1.9 |
| pfu_aug1.0_15162.1_61461.t1 | 4 | 2 | Arm | 108 | 128 | 8.2e-10 | 38.1 | 0.81 | 1100.0 | -0.4 |
| pfu_aug1.0_15162.1_61461.t1 | 3 | 2 | Vac14_Fab1_bd | 131 | 210 | 1.4e-07 | 31.7 | 5.4e-05 | 0.073 | 13.4 |
| pfu_aug1.0_15162.1_61461.t1 | 4 | 3 | Arm | 148 | 175 | 8.2e-10 | 38.1 | 2.9e-08 | 3.9e-05 | 23.3 |
| pfu_aug1.0_15162.1_61461.t1 | 4 | 3 | HEAT_2 | 151 | 217 | 4.9e-21 | 74.8 | 1.9e-11 | 2.6e-08 | 34.0 |
| pfu_aug1.0_15162.1_61461.t1 | 4 | 3 | HEAT_EZ | 152 | 175 | 1.9e-08 | 34.5 | 2.0e-07 | 0.00026 | 21.3 |
| pfu_aug1.0_15162.1_61461.t1 | 4 | 4 | HEAT_2 | 153 | 249 | 4.9e-21 | 74.8 | 2.8e-12 | 3.8e-09 | 36.7 |
| pfu_aug1.0_15162.1_61461.t1 | 4 | 3 | HEAT | 153 | 178 | 5.2e-16 | 57.2 | 4.0e-08 | 5.4e-05 | 22.9 |
| pfu_aug1.0_15162.1_61461.t1 | 2 | 2 | Adaptin_N | 154 | 243 | 2.2e-07 | 29.5 | 2.6e-07 | 0.00035 | 19.0 |
| pfu_aug1.0_15162.1_61461.t1 | 3 | 3 | Vac14_Fab1_bd | 174 | 236 | 1.4e-07 | 31.7 | 0.0025 | 3.3 | 8.1 |
| pfu_aug1.0_15162.1_61461.t1 | 4 | 4 | Arm | 194 | 218 | 8.2e-10 | 38.1 | 0.00036 | 0.48 | 10.3 |
| pfu_aug1.0_15162.1_61461.t1 | 4 | 4 | HEAT_EZ | 194 | 218 | 1.9e-08 | 34.5 | 0.0012 | 1.6 | 9.3 |
| pfu_aug1.0_15162.1_61461.t1 | 4 | 4 | HEAT | 195 | 222 | 5.2e-16 | 57.2 | 1.2e-05 | 0.016 | 15.2 |
| pfu_aug1.0_15162.1_61461.t1 | 3 | 3 | CLASP_N | 197 | 234 | 1.4e-07 | 31.0 | 0.032 | 43.0 | 3.3 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
| Dshape | 1 |
| mantle | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_15162.1_61461.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15162.1_61461.t1 ctacaccaacttgccagaacccagacttcaaatctaaagtgctaaaccatttggatcctgataatgcatcgagagtatcg tcaattctaggtattgctgagagtttaaagaagctactcacagatgctgatcttacagttagacaaaaagctacagagtg tttgtttgttataggaggtcatgctgttgggagagatgcatttctagagaatcagataattactcctgtatctaagttgt ttgatgataaagaggatattgctcgtaaaaatgcccacaaggcagtggaaatgatttcagaaacaccacttggagctgaa ggaattgtagaagcaaacttaatagccacacttgttaaaaaattagcatcagaagtagatgaaataaagaatatattttc tttattacatttcagtataccattagagggtaaaaataaagcagtagaagtgaaatcagttccagctcttgtcaaattac tcaaagatcaaagttcagatgtcagagctaatgctgctggagctctcatggccattactatcacaacaaaaggaaaatat acagcaataaatgaagggaaagcaatacagccattggtagacctggttgatgactcagtatcagaagtccgactcaatgc attgaaggcattgacctgtttgtcagaggcaccagaaggaagaaaagtattattacaacatgtagagaagatcaaggcac acaccacagatcccattcctgcagttgtcaaagcagcggaaattgctgtaagggttattacatggaaaccatga |
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Protein
| Protein ID | pfu_aug1.0_15162.1_61461.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15162.1_61461.t1 TPTCQNPDFKSKVLNHLDPDNASRVSSILGIAESLKKLLTDADLTVRQKATECLFVIGGHAVGRDAFLENQIITPVSKLF DDKEDIARKNAHKAVEMISETPLGAEGIVEANLIATLVKKLASEVDEIKNIFSLLHFSIPLEGKNKAVEVKSVPALVKLL KDQSSDVRANAAGALMAITITTKGKYTAINEGKAIQPLVDLVDDSVSEVRLNALKALTCLSEAPEGRKVLLQHVEKIKAH TTDPIPAVVKAAEIAVRVITWKP |
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