Gene
| Gene Model ID | pfu_aug1.0_15168.1_61462 |
|---|---|
| Locus | scaffold15168.1 : 8725 ... 12928 : - |
| To GenomeBrowser | scaffold15168.1:8725..12928 |
| Genes list of scaffold | scaffold15168.1 |
| Synonym | pfu_aug2.0_1755.1_18510 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_15168.1_61462.t1 | 1 | 1 | TatD_DNase | 1003 | 1205 | 3.7e-25 | 88.6 | 4.8e-29 | 7.2e-25 | 87.6 |
Transcript
| Transcript ID | pfu_aug1.0_15168.1_61462.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15168.1_61462.t1 agggaatgccatcttcacatttacactttgatgcttcaagtcatccttctgttgcccatcaccaaaatgtgaaaataccc gattttatacaagatgaccacgtgatgcagacaagtacatacgctattggcaatcaaatagggagaagaccagcattgtt acctacaccagatatgactgttgccagtggtaccaatgataccaagagccaaaatcctagtcctcaatcagctagagctg catctcaattagggagaattgcatctcatacttctaatgatggaaacagtgccacttattcgaaagatcagtatggctat ggagcacctactgtgttacctactccaaaattgaatgttaccgatggattcagtaatcctaagagtcaaaattctagtcc tcacttagctagaactacatctcatacttctaataacattgccaataattcaaaagatcaatatcgctatggtcaaccca ctgtgttacctactccaaaaatgaatgttactgatgtcagcagtaatactaagagtcaaaatccaagtcctcaaacagct agagctacatctcatgcttctaataatgggaaaaatgccactaattcaaaggatcagtatcgctattctgcacctactgc acttccagagtcagctagagtatggataaatcctaatttacagaagcaggcaccaaaacctgcatcaatacatgaaagca tttggaaaaaatacagcagaaagaggaaatctggaccttttgatgtgactaaccctttgaaaagaaaaattcctgaatca ggccaaggtaatgatacatcagatactcagaactctgataagtcctttgaagaaaatcctgatgcagatgtacaggattc atcagtgccaaagaaaagagacgcagacccaaaaacccatacagccgaggtctgcattcaaaatggactccaaaaacggc aagatatcgcaaacatggagtccatgtgcagggcaatgaattgggagaggccacctgcatttacactacatcctatcaac tctcccagtgtactcttgttctggcgatgtctgctcaatctggccatgatgttaaaaccagaggatcatcagcgcttcat gaaagaaactacgacaaacctgcttaaacagtactattcagaaaattcaactgcagaagcaaaagatgtggttaacagac cagtatctgtagagcagaaagcaaacacaacatcgtcacaaccaaacgttgctttattaggaagaaatgatataaactca agactggaaaatataaggaagctaattgctcagcatgctgatgttgataaggtgcagatacctaactttaaaagtattgg agccgtaggtcagcagaaatcacctgacattaagagcagtactacattaggacccaggaaggcatccgactttcatagtc cagcaaatttaggtaaccagacattgcctgatgttaagagaagtgtacctgtaggttaccaaaggacacccaattttcag agtgttgcaagttcaggtaaccatacgatgcatggtaataagagtaatttagcatcagatagcccaaagacacccagtat tcaaagtattacaacctcgggtaaacatacattgccggacattcagagaagtgaagctgtaggtagacaaagggcaccca actttcagagtgttgaaagtcaaggtaacaaaaggatgacagacgttagaaggaatgttgctgtaagtaaccagatgaca actgattttcagagggttcccagcttagataaacagagagcatcagactttcagagtattgcagcattcgagaaccggaa ggcaactgattctaacactatttcaacctttggtaataaccaggggacacctgactttcagagtatttcagcttcaggta tcaaaaagacaccagactctacaagttcagatatatttaggagcaaccagcagacacatgactccatgcattttgcagcc ttcagtagcaaccagcagagtcctgataccagaagttttgcagcctttggtagcaaccagaaggcacctgactttcagag tattgcagcattaagtagcaaaatgtcaccaagctccacgagttctgcagccttcagtagcaaccaagagagtcctgatt ccatgagttttaccacctttggtagcaaccaacagagtcctgactctcagaatattcagcttttcagcaaccagccgaca actgatgctaagaatattcaacagttcagtaggcacgagcaggcatatgcctttatgagaagagttcaagcccttaacag aaaccagagggcgccaggtcctaagaagaatgccgctgtaaatagaaaccagcagatgtcaaactttaataaaggtgtag ccttgaatagcatccagccgccaccagaatttaagagggtagaacctttaataagtctgcaacaatcaccagacttgatg aggagttcagccttgagaggaaatcaagagatccctacatttgagaggattgcagcatcaaacagtacccaacagtcacc tgattttaaaagtattgcagtctcaagtaaccaacagacatctgactttaaaagtgcggccgcccaaagtaaccaaaaca gtgaagtgtccagtactcaagggcctccagaagagatgatgtcatctttgggtggatggagagatggtagtgacagtaag aaaacagcgagtggacaccagaaagcagccgctgcatctatgtcaagtattcttctagaaaatgtggactgtgtgttcga ctcatatttaaatgttgaggaaatgtgtcagatattgtataagaggaaaagttggtcatttgggagacagcctttgaaga cgatttttaaaactaggataatgagagaggttgaaccaaaacatgcagtgacggtagtagggggagtaatgatattcgat gatccaagttgctatccgaaaaagtctcacgttgaccctacgtggaatgtggcgtttggcgtacatccaaaacatgctcc atttcttacggaggagcaattaagtagacttgccaaaattttgcaaggaagagagattcgggcattgggaacgataggat tcgactatacagaacagaagacgtactgggattttcaagaggaggttttcgttaatcttctaggactgagtgaacctgac agacctataataattcatgtaaaaggcgtggagggagatgtgcttggatccagtgttcataagaaatgctttactaaagt gaaagaaaaatgtccaaagcaacagaaaattcaattgcattcattttctggtactcccgaagatgtcggaatgtggacga cagaattttctaattgctacttcagcttcacgtggaatgtagagttctttaacgagattcagaagagtgctatcaggagt gtaccacatgacaaaatcttgatcgagactggaattttggaccagtctgtctcattaccgaggactgcgatcaagagacc cactcaactgggtgatctcgcttctttgattgctgagataaggggagaaaagttcgatgaattcttgaagcaaaccgtag aaaatggacaacgcctacatgggacgagaatagtcaagaaaaaatcacgatga |
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Protein
| Protein ID | pfu_aug1.0_15168.1_61462.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15168.1_61462.t1 GMPSSHLHFDASSHPSVAHHQNVKIPDFIQDDHVMQTSTYAIGNQIGRRPALLPTPDMTVASGTNDTKSQNPSPQSARAA SQLGRIASHTSNDGNSATYSKDQYGYGAPTVLPTPKLNVTDGFSNPKSQNSSPHLARTTSHTSNNIANNSKDQYRYGQPT VLPTPKMNVTDVSSNTKSQNPSPQTARATSHASNNGKNATNSKDQYRYSAPTALPESARVWINPNLQKQAPKPASIHESI WKKYSRKRKSGPFDVTNPLKRKIPESGQGNDTSDTQNSDKSFEENPDADVQDSSVPKKRDADPKTHTAEVCIQNGLQKRQ DIANMESMCRAMNWERPPAFTLHPINSPSVLLFWRCLLNLAMMLKPEDHQRFMKETTTNLLKQYYSENSTAEAKDVVNRP VSVEQKANTTSSQPNVALLGRNDINSRLENIRKLIAQHADVDKVQIPNFKSIGAVGQQKSPDIKSSTTLGPRKASDFHSP ANLGNQTLPDVKRSVPVGYQRTPNFQSVASSGNHTMHGNKSNLASDSPKTPSIQSITTSGKHTLPDIQRSEAVGRQRAPN FQSVESQGNKRMTDVRRNVAVSNQMTTDFQRVPSLDKQRASDFQSIAAFENRKATDSNTISTFGNNQGTPDFQSISASGI KKTPDSTSSDIFRSNQQTHDSMHFAAFSSNQQSPDTRSFAAFGSNQKAPDFQSIAALSSKMSPSSTSSAAFSSNQESPDS MSFTTFGSNQQSPDSQNIQLFSNQPTTDAKNIQQFSRHEQAYAFMRRVQALNRNQRAPGPKKNAAVNRNQQMSNFNKGVA LNSIQPPPEFKRVEPLISLQQSPDLMRSSALRGNQEIPTFERIAASNSTQQSPDFKSIAVSSNQQTSDFKSAAAQSNQNS EVSSTQGPPEEMMSSLGGWRDGSDSKKTASGHQKAAAASMSSILLENVDCVFDSYLNVEEMCQILYKRKSWSFGRQPLKT IFKTRIMREVEPKHAVTVVGGVMIFDDPSCYPKKSHVDPTWNVAFGVHPKHAPFLTEEQLSRLAKILQGREIRALGTIGF DYTEQKTYWDFQEEVFVNLLGLSEPDRPIIIHVKGVEGDVLGSSVHKKCFTKVKEKCPKQQKIQLHSFSGTPEDVGMWTT EFSNCYFSFTWNVEFFNEIQKSAIRSVPHDKILIETGILDQSVSLPRTAIKRPTQLGDLASLIAEIRGEKFDEFLKQTVE NGQRLHGTRIVKKKSR |
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