Gene
| Gene Model ID | pfu_aug1.0_15180.1_32518 |
|---|---|
| Locus | scaffold15180.1 : 3134 ... 12645 : - |
| To GenomeBrowser | scaffold15180.1:3134..12645 |
| Genes list of scaffold | scaffold15180.1 |
| Synonym | pfu_aug2.0_1629.1_31801 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_15180.1_32518.t1 | 4 | 1 | ShK | 5 | 18 | 2.8e-25 | 88.3 | 7.6e-07 | 0.011 | 16.0 |
| pfu_aug1.0_15180.1_32518.t1 | 4 | 2 | ShK | 64 | 101 | 2.8e-25 | 88.3 | 6.2e-11 | 9.2e-07 | 29.1 |
| pfu_aug1.0_15180.1_32518.t1 | 4 | 3 | ShK | 144 | 179 | 2.8e-25 | 88.3 | 6.5e-12 | 9.6e-08 | 32.2 |
| pfu_aug1.0_15180.1_32518.t1 | 4 | 4 | ShK | 182 | 217 | 2.8e-25 | 88.3 | 4.5e-11 | 6.7e-07 | 29.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_15180.1_32518.t1 | gi|221123763|ref|XP_002164184.1| | 6.0e-14 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
| mantleEdge | 1 |
Transcript
| Transcript ID | pfu_aug1.0_15180.1_32518.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15180.1_32518.t1 atgaagaatcctgtctggatgcacgataactgtgccaagtcatgtaatacatgtaataaaggtagtaaagatgatgatga tgacgacagcacacgtgtaggacgacggggcaacaatggcggatctaacgatagaaatgacaacagcaataatgttccta aagatgacccttcaaatggtggaaccgtgtgcaaaaatgaccataaaaatgataaagactgtaatacatgggcaaaatat gggcactgcaggataaacccatcctatatgcataaaaactgtaagctggcatgtggagtttgtactcctagagaggacac aaatgcaggcaggaatgacagacaaaatgatggatcacatgacgaatcacgtggcggacagcagacgacaactactcgga gaccaatgactacgactcctccatacaatccgtgtgttgattctcatccaagttgtccggcttgggcaaaggttaattat tgctacaacaatccagaacaggctctgaagcagtgcaagaagtcttgtaataattgtccagggacttgcaccgacaacca tctcttgtgtagagtatgggctaaggataaagggtgtataacaagtccaaaatactcggagcggttctgtaggaagtcat gtggcttttgctga |
|
Protein
| Protein ID | pfu_aug1.0_15180.1_32518.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15180.1_32518.t1 MKNPVWMHDNCAKSCNTCNKGSKDDDDDDSTRVGRRGNNGGSNDRNDNSNNVPKDDPSNGGTVCKNDHKNDKDCNTWAKY GHCRINPSYMHKNCKLACGVCTPREDTNAGRNDRQNDGSHDESRGGQQTTTTRRPMTTTPPYNPCVDSHPSCPAWAKVNY CYNNPEQALKQCKKSCNNCPGTCTDNHLLCRVWAKDKGCITSPKYSERFCRKSCGFC |
|