Gene
| Gene Model ID | pfu_aug1.0_1519.1_66004 |
|---|---|
| Locus | scaffold1519.1 : 54586 ... 65164 : + |
| To GenomeBrowser | scaffold1519.1:54586..65164 |
| Genes list of scaffold | scaffold1519.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1519.1_66004.t1 | 7 | 1 | Sushi | 76 | 133 | 2.4e-23 | 82.2 | 1.5e-14 | 4.3e-11 | 42.9 |
| pfu_aug1.0_1519.1_66004.t1 | 7 | 2 | Sushi | 138 | 190 | 2.4e-23 | 82.2 | 1.5e-07 | 0.00043 | 20.5 |
| pfu_aug1.0_1519.1_66004.t1 | 4 | 1 | EGF_CA | 156 | 170 | 4.2e-11 | 42.6 | 0.63 | 1900.0 | -1.1 |
| pfu_aug1.0_1519.1_66004.t1 | 4 | 2 | EGF_CA | 192 | 235 | 4.2e-11 | 42.6 | 5.3e-10 | 1.6e-06 | 28.0 |
| pfu_aug1.0_1519.1_66004.t1 | 7 | 3 | Sushi | 217 | 237 | 2.4e-23 | 82.2 | 0.18 | 540.0 | 1.0 |
| pfu_aug1.0_1519.1_66004.t1 | 4 | 3 | EGF_CA | 237 | 265 | 4.2e-11 | 42.6 | 2.7e-10 | 8.0e-07 | 28.9 |
| pfu_aug1.0_1519.1_66004.t1 | 7 | 4 | Sushi | 250 | 275 | 2.4e-23 | 82.2 | 0.89 | 2600.0 | -1.2 |
| pfu_aug1.0_1519.1_66004.t1 | 7 | 5 | Sushi | 295 | 346 | 2.4e-23 | 82.2 | 1.7e-06 | 0.005 | 17.1 |
| pfu_aug1.0_1519.1_66004.t1 | 7 | 6 | Sushi | 351 | 398 | 2.4e-23 | 82.2 | 9.2e-10 | 2.7e-06 | 27.6 |
| pfu_aug1.0_1519.1_66004.t1 | 4 | 4 | EGF_CA | 380 | 393 | 4.2e-11 | 42.6 | 0.15 | 450.0 | 0.9 |
| pfu_aug1.0_1519.1_66004.t1 | 7 | 7 | Sushi | 527 | 551 | 2.4e-23 | 82.2 | 0.1 | 300.0 | 1.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1519.1_66004.t1 | gi|221132728|ref|XP_002161897.1| | 4.0e-24 |
Transcript
| Transcript ID | pfu_aug1.0_1519.1_66004.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1519.1_66004.t1 atgaacaagtcaacagacgtggatggagtgtgtccatatcatatggtaagtagtaatttcacatctataattagtcaaac ccttactgacagattacggtctgacagcggtaactttgatctcaactttataactgacgaacaagtcaacagacgtggat ggagtgtgtccatatcatatgaattgaagaataattttttgttcgatatcttttcagaaatatcatgtccaaaactagta cctttaccaaatggtgacaacagaaatacagaatatccgagcaattataagtttggagccagagttaagtactcttgtat gccaggagatcgtctgattggttacaatgtgtctgtctgtggtgaggacggacagtggacacacccacctccacaatgtc tagctccagtatgtgacgaaatcagcattccccatgccgtatggaatatgacttacgtgacaggcggggattacgtagga gtcatgtgtaaccatgggtacagaatgagaggtgaagccgtggtatattgtaattccacaggccaatatgaaaccccatt tccatcttgtatagatatagatgaatgttcggacctggatgacgatccgtgtttacggcatacgtgtgtaaatactcccg gagactattactgtcagtgtaatgttgggtatcaccatgtcaacagcactgaaagcaaaatatgtcaagatatagatgaa tgtagcgagagcacaccatgtgagacaaattgtcataacaccatcggaagcttcaggtgcgagtgtatcgatggtgaagt actgtatacaggtcaaaaggtcattgtccatggtaacagagtattgcagcctaactattcatgtgtcgtcgtccattgcc aaaacttgacagcaccagagaatggtagagtttcttggaattctaccgtgtacggtgcgatagcggagtataaatgtcag tgtggatatgatctggtgggtcataggtaccgttactgtggacacgacatgctgtggaatggcactaatgctatatgtgt ccccgcaacatgtccagttccccagtcccccctgtatggatcttaccatcggttgtcattgtccaatatgtacactgtcg gcagttctgttggatacacttgccgggaaggatatgaaatttctgggtccacaaacacctcctcctgcattcttagtgat tcacaagagagcagtacaccaatacgtgtgatagtggtagaactgagtttccgtgctgctgtctccgttaccaatcagac atgcgcatcatattacgagaggaaaatcaaggagcagatcaacactgtatctttgctgcttcactgtcccgatgtcaaca ttgggtctatactggctaatagctcacctacttctggaactaccactgtttcaataaatatatcaattgccatccaatca aagagctcctcgaacaacagccaggtttgtgcatgcgaaagcagtataggatctaaattcaaagatattagtcttgatgc ctccggagaatgtcctcagcttaggaacaagaataatggggtggtgagaattgccaactggacgtgcgaggcaggatata tgctcgaacacggagactcgtcatgtgacagtatgccggcccctacgtgtaccaagaaaggctgctataatggaagatcc tctattacgaccagtcagaacgctcgatag |
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Protein
| Protein ID | pfu_aug1.0_1519.1_66004.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1519.1_66004.t1 MNKSTDVDGVCPYHMVSSNFTSIISQTLTDRLRSDSGNFDLNFITDEQVNRRGWSVSISYELKNNFLFDIFSEISCPKLV PLPNGDNRNTEYPSNYKFGARVKYSCMPGDRLIGYNVSVCGEDGQWTHPPPQCLAPVCDEISIPHAVWNMTYVTGGDYVG VMCNHGYRMRGEAVVYCNSTGQYETPFPSCIDIDECSDLDDDPCLRHTCVNTPGDYYCQCNVGYHHVNSTESKICQDIDE CSESTPCETNCHNTIGSFRCECIDGEVLYTGQKVIVHGNRVLQPNYSCVVVHCQNLTAPENGRVSWNSTVYGAIAEYKCQ CGYDLVGHRYRYCGHDMLWNGTNAICVPATCPVPQSPLYGSYHRLSLSNMYTVGSSVGYTCREGYEISGSTNTSSCILSD SQESSTPIRVIVVELSFRAAVSVTNQTCASYYERKIKEQINTVSLLLHCPDVNIGSILANSSPTSGTTTVSINISIAIQS KSSSNNSQVCACESSIGSKFKDISLDASGECPQLRNKNNGVVRIANWTCEAGYMLEHGDSSCDSMPAPTCTKKGCYNGRS SITTSQNAR |
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