Gene
| Gene Model ID | pfu_aug1.0_1519.1_66006 |
|---|---|
| Locus | scaffold1519.1 : 72596 ... 96595 : + |
| To GenomeBrowser | scaffold1519.1:72596..96595 |
| Genes list of scaffold | scaffold1519.1 |
| Synonym | pfu_aug2.0_12945.1_19795 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1519.1_66006.t1 | 2 | 1 | GCC2_GCC3 | 696 | 742 | 4.9e-08 | 32.4 | 3.3e-12 | 4.9e-08 | 32.4 |
| pfu_aug1.0_1519.1_66006.t1 | 2 | 2 | GCC2_GCC3 | 762 | 780 | 4.9e-08 | 32.4 | 1.0 | 15000.0 | -6.6 |
Transcript
| Transcript ID | pfu_aug1.0_1519.1_66006.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1519.1_66006.t1 atgtcacaatttactttgattaatattttaaaattgacactttcatttcaggtttaccttacgataccatttgcaataca aagtaaatctgtccccattgggacgctggagagctgtgtccatgacaacgtcacgaagtacgtgaacaaggtgttcagga gtgacctacagagtattctgtcacagtctcatgaacactgcagcttggtgaacatgctggagtttgaaccacacgttcaa gttcaatgcccccatctttatgtatacaacaatctcagccaagtatgtgaattctatcagatcagcacacagacagttga taccgtacaaacaacgacaacttcagctcctaggacaacttcttctgtggcactgccagtttctattccgtacataccga ttcttgacgtgcagttgacggtgagattcacaacctccgtgaactcagaatcggaaatttactgtaacgaacaactgacc actctcatacagaatgcattacggagccaagcacagtcgatcaatgatctaccgaatatttctgatagatgtggggacca gaatattcatattgccctctcggatcgtataacggcttccagaaaccactcggaatttatcgccctagtgattatgtcat ttcacgccacatctgaaaatgttgagacactgaagtttaacatatgtttttcgactgttttggacgaggtacagcgaaac cctgagattctgcttggcagtagatttttagattcaggagacccctgtgggaacctcaccgtacagacggccttgtacac caataggacgtaccattgccctgctggattcacctacctagcagagtatcacaaatgtgccaatgattctggagccatct tcatttctatgatcgacactacctaccgagtttttcagatacaaaacatatcatgttttcaaacactgaccctcagcctg aaaaagtacattgtcaactttgaagcatcacaacccactttgaatatcaaaccagaatgtaacgacactgtactgctgcg tggtaataacatcacatcaaaagttactgaggatcctgggaacaatgacactatggtgttgtactccgttaaactggagt ttcagaatcttaaaggagataactaccgggccactatttgtgaacagaaggtacgagagactttcctctcggagggtggt atgaagaccttcttagaagacaatgtcgtgaacgaaacttctccaagttgtaccattcgcccgttgatgacaaattacga ctttagcagccgatatttccaatgtcctgctgggtcacgatgggaaaatcattcaatggcatgcacagatgacagaagtt ttaccagcatgcatgtggaaagcaccacactcccccctacacaatattctacaactcttaatcaaaatttgccttccgaa caaacaatgcaaacaacacagcaaataaattctgtacctagtcaaatgtccacagtttcaaatcgtgtgactgacgaatt ccaaccctcaaatactttaagttcaactgatgtccaaactccctattccacagtacatgtatcattctttacagtacccg gatcaaataaaataacgactcatggatcagccaatgagattgaaaccacatcattaaaagtcaatacgaactttgtattg actgattcagagcaaggggaattcactagtacattagaaactcaaactagtgtatcaaatttaccatcaaatgacattac tattcaagaaacaactactcaagaaacaaagtcacaagaaacaagtacacaagtcatgactactcaagaaacaactacac aagacatgactactcaagaaacaagtacacaagacatgactactcaagaaacaacgtacacaagacatgactactcaaga aacaagtacacaagacatgactactcaagaaacaaatttgtcaaacaacagtgtcttatcagaagaaaaaagcctacatt tcaaaatcttgtattccgaaagatgaatgtgaaacagctgcattgtcaagcagccatattacttcaatcagagttatgcc ctcctggtgagtactcagtgaacggacttcagccctgtaccaaatgtgccgtgggtaactatactgatatgcaagggtcc ctacgctgtcagtcatgtaatgggcggacaactctgtcaactggctccacctcagctgatgactgttatgggtttaccgg cagtttctgcgagacgagggtagacaaatgtgtagacaactccatctgtggcagcaatgcttactgtataacgacacaag acttcaatactacatgtatttgtaagggcgtcactgtaacattgaggtactcgagtgtggatccagtccttgtcaacacg gcgcgacgtgccaagatttacaaaacgactatttatgtaaatgtcctcccggctttactggaaaagactgctcaattccc aacagctgtctgtccaccccttgtttcaataatggaacatgccagtacacagatgacaggagtgattattattgtacatg tgggcggggcttcagtggaagtaggtgtgagattaacattgatgaatgtgcctccgacccctgtcaaaacagtggaacat gccatgactttgtcaatggattcagatgcaggtcctgcgattcgcgaatataaaatgctgcgaataaatgtcgttacata tgtatag |
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Protein
| Protein ID | pfu_aug1.0_1519.1_66006.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1519.1_66006.t1 MSQFTLINILKLTLSFQVYLTIPFAIQSKSVPIGTLESCVHDNVTKYVNKVFRSDLQSILSQSHEHCSLVNMLEFEPHVQ VQCPHLYVYNNLSQVCEFYQISTQTVDTVQTTTTSAPRTTSSVALPVSIPYIPILDVQLTVRFTTSVNSESEIYCNEQLT TLIQNALRSQAQSINDLPNISDRCGDQNIHIALSDRITASRNHSEFIALVIMSFHATSENVETLKFNICFSTVLDEVQRN PEILLGSRFLDSGDPCGNLTVQTALYTNRTYHCPAGFTYLAEYHKCANDSGAIFISMIDTTYRVFQIQNISCFQTLTLSL KKYIVNFEASQPTLNIKPECNDTVLLRGNNITSKVTEDPGNNDTMVLYSVKLEFQNLKGDNYRATICEQKVRETFLSEGG MKTFLEDNVVNETSPSCTIRPLMTNYDFSSRYFQCPAGSRWENHSMACTDDRSFTSMHVESTTLPPTQYSTTLNQNLPSE QTMQTTQQINSVPSQMSTVSNRVTDEFQPSNTLSSTDVQTPYSTVHVSFFTVPGSNKITTHGSANEIETTSLKVNTNFVL TDSEQGEFTSTLETQTSVSNLPSNDITIQETTTQETKSQETSTQVMTTQETTTQDMTTQETSTQDMTTQETTYTRHDYSR NKYTRHDYSRNKFVKQQCLIRRKKPTFQNLVFRKMNVKQLHCQAAILLQSELCPPGEYSVNGLQPCTKCAVGNYTDMQGS LRCQSCNGRTTLSTGSTSADDCYGFTGSFCETRVDKCVDNSICGSNAYCITTQDFNTTCICKGVTVTLRYSSVDPVLVNT ARRAKIYKTTIYVNVLPALLEKTAQFPTAVCPPLVSIMEHASTQMTGVIIIVHVGGASVEVGVRLTLMNVPPTPVKTVEH AMTLSMDSDAGPAIREYKMLRINVVTYV |
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