Gene
| Gene Model ID | pfu_aug1.0_15228.1_68837 |
|---|---|
| Locus | scaffold15228.1 : 11716 ... 25669 : + |
| To GenomeBrowser | scaffold15228.1:11716..25669 |
| Genes list of scaffold | scaffold15228.1 |
| Synonym | pfu_aug2.0_164.1_13716 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_15228.1_68837.t1 | 1 | 1 | Tubulin | 2 | 78 | 8.0e-21 | 74.8 | 2.1e-24 | 1.5e-20 | 73.9 |
| pfu_aug1.0_15228.1_68837.t1 | 1 | 1 | Tubulin_C | 116 | 244 | 0.0 | 165.1 | 0.0 | 0.0 | 164.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_15228.1_68837.t1 | gi|41053862|ref|NP_957202.1| | tubulin gamma-1 chain [Danio rerio] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_15228.1_68837.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15228.1_68837.t1 atgggttcatacttactggagagacttaatgacaggtttccaaagaagttagtacagacatactcagtgttccctaactt ggacgagatgtcagatgtcgtagtacagccttacaactcgttactcactctgaaaagacttacacaaaatgccgactgtg tggtagtgttggataacacagctttgaataggatagctgctgacagacttcacatagaaactccaaacttctcacaaatc aaccaactggtttccacggtgatgtctacaagtacagccaccctgcgttaccctggttatatgaacaacgatcttattgg tctgatagcctcccttatacctacaccaagattacattacctgatgacgggatatacacctcttgccacggatatgaacg ttgccagtgtgagaaaaactacagtattagacgttatgaggcggttactacagcccaaaaacatgatggtctctactcca gtacaaagacaagccaaccattgttatatctctatactcaatattatacagggcgaggttgatccaacacaggtacacaa aagtctacagcggatcagggagcgtaagttggcccagtttattccctggggaccggccagtatccaagtagctttatcac ggaagtctccctacatacagacgtcacatagagtcagtgggcttatgttggccaaccatacaagtatatctagtttgttt gagcgcaccctcagacagtacgacaagttaaggaagagagaagctttcatggatcagtttaagaaagaagcaatgtttaa agacaatttagatgagtttgataattctcgagaagtcattcagcaactggtggacgagtatcaggcggcgacaaaacctg actatctctcatggggaacgcaacag |
|
Protein
| Protein ID | pfu_aug1.0_15228.1_68837.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15228.1_68837.t1 MGSYLLERLNDRFPKKLVQTYSVFPNLDEMSDVVVQPYNSLLTLKRLTQNADCVVVLDNTALNRIAADRLHIETPNFSQI NQLVSTVMSTSTATLRYPGYMNNDLIGLIASLIPTPRLHYLMTGYTPLATDMNVASVRKTTVLDVMRRLLQPKNMMVSTP VQRQANHCYISILNIIQGEVDPTQVHKSLQRIRERKLAQFIPWGPASIQVALSRKSPYIQTSHRVSGLMLANHTSISSLF ERTLRQYDKLRKREAFMDQFKKEAMFKDNLDEFDNSREVIQQLVDEYQAATKPDYLSWGTQQ |
|