Gene
| Gene Model ID | pfu_aug1.0_1524.1_66010 |
|---|---|
| Locus | scaffold1524.1 : 22006 ... 39516 : + |
| To GenomeBrowser | scaffold1524.1:22006..39516 |
| Genes list of scaffold | scaffold1524.1 |
| Synonym | pfu_aug2.0_1120.1_01395 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1524.1_66010.t1 | 4 | 1 | Med24_N | 1 | 64 | 1.3e-35 | 122.3 | 3.9e-18 | 5.8e-14 | 50.6 |
| pfu_aug1.0_1524.1_66010.t1 | 4 | 2 | Med24_N | 80 | 115 | 1.3e-35 | 122.3 | 3.1e-06 | 0.046 | 11.2 |
| pfu_aug1.0_1524.1_66010.t1 | 4 | 3 | Med24_N | 116 | 190 | 1.3e-35 | 122.3 | 1.3e-16 | 1.9e-12 | 45.6 |
| pfu_aug1.0_1524.1_66010.t1 | 4 | 4 | Med24_N | 195 | 243 | 1.3e-35 | 122.3 | 6.3e-08 | 0.00093 | 16.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1524.1_66010.t1 | gi|343960356|dbj|BAK64032.1| | thyroid hormone receptor-associated protein complex 100 kDa component [Pan troglodytes] | 1.0e-16 |
Transcript
| Transcript ID | pfu_aug1.0_1524.1_66010.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1524.1_66010.t1 atgaaccaggcgtttgttggacctaatcctaacacattgatactaggatacgtgaagcacatcgtacaatcacagatggt accgccaagctccgtttttaacctcattgacaagtatactgacatggcaaggccctactgcattctgggattgatagacc ttgttgaaacttttggcacaaagttgagggtacatgacctaggcttgtcgagccaggctatatttgatgtcacagacatg tctatatgtcacaccgtcaacgctatgatcgccatggaggcggtactttgtccaaccaatgatatacagccatttgtcga gcagatccgagtgacagagagacttctcgagatgctggtcagtaatcgtgtagaggatctaaccaaggcactgagtctga cgtactctatatttcacatggacatagaacatatagcgttgagtttgatgttccacatgcttcctaagttcctacagacc ccacactacagtcagctgttaactgatcctaagggatacacgttagccaagctaagtgtagctatcattacggcagctca gacagctagaactacagaaaaagccaacctgatgcggctaatgaatgctgtttgccaggaacagaagttatgtccacgta tcagttttattatcagctttatcaatgaagcccttaaatgcggcagccagtattcacgttatatcctacagtttatgcct cctcaaatgaaattgttgacacaatctggaactattttccactggaagcctacaaagcaagcatacattgagcttgaatt acgaaagcagtaa |
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Protein
| Protein ID | pfu_aug1.0_1524.1_66010.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1524.1_66010.t1 MNQAFVGPNPNTLILGYVKHIVQSQMVPPSSVFNLIDKYTDMARPYCILGLIDLVETFGTKLRVHDLGLSSQAIFDVTDM SICHTVNAMIAMEAVLCPTNDIQPFVEQIRVTERLLEMLVSNRVEDLTKALSLTYSIFHMDIEHIALSLMFHMLPKFLQT PHYSQLLTDPKGYTLAKLSVAIITAAQTARTTEKANLMRLMNAVCQEQKLCPRISFIISFINEALKCGSQYSRYILQFMP PQMKLLTQSGTIFHWKPTKQAYIELELRKQ |
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