Gene
| Gene Model ID | pfu_aug1.0_1524.1_66011 |
|---|---|
| Locus | scaffold1524.1 : 40277 ... 56039 : - |
| To GenomeBrowser | scaffold1524.1:40277..56039 |
| Genes list of scaffold | scaffold1524.1 |
| Synonym | pfu_aug2.0_1120.1_01397 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1524.1_66011.t1 | 2 | 1 | AAA_16 | 90 | 131 | 7.0e-08 | 32.6 | 3.5e-09 | 1.7e-06 | 28.1 |
| pfu_aug1.0_1524.1_66011.t1 | 2 | 1 | AAA_22 | 101 | 124 | 2.9e-07 | 30.6 | 3.4e-07 | 0.00017 | 21.7 |
| pfu_aug1.0_1524.1_66011.t1 | 1 | 1 | RuvB_N | 101 | 169 | 5.7e-06 | 25.5 | 1.8e-08 | 9.0e-06 | 24.8 |
| pfu_aug1.0_1524.1_66011.t1 | 1 | 1 | AAA | 102 | 169 | 1.5e-24 | 86.6 | 5.3e-27 | 2.6e-24 | 85.8 |
| pfu_aug1.0_1524.1_66011.t1 | 2 | 2 | AAA_22 | 131 | 184 | 2.9e-07 | 30.6 | 0.01 | 4.9 | 7.2 |
| pfu_aug1.0_1524.1_66011.t1 | 2 | 2 | AAA_16 | 145 | 168 | 7.0e-08 | 32.6 | 0.13 | 65.0 | 3.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1524.1_66011.t1 | gi|328792507|ref|XP_623784.2| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
| Dshape | 1 |
| maleGonad | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1524.1_66011.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1524.1_66011.t1 ttattgtgaaggctactaatggtcccagatacgttgtgggatgtcgtaggcagttagacaagagtaaactgaaaccgggc acacgagtggcgttagatatgactacactcacggtcatgagatacttaccgagagaggtggatccattggtgtataacat gtctatagaggatccaggtgatgtcagctataaccagatcggaggattgggagaacagatacgagaactcagagaggtga tagagttacccctaatgaacccagagttatttcagagggtagggattaccccacccaagggttgtcttctttatggaccc ccagggacaggaaagaccctgttagccagagcggtggccagtcaacttgatgcaaacttccttaaagtggtatctagtgc tatagtagataaatacatcggagaaagtgctcggctgatcagagagatgtttgcttttgccagagatcatgagccgtgta ttatatttatggatgaaatagatgctatagagattcctcttcctaatgaacagtcaaggctagaaatcctaaagattcat gcacaaccaatagcaaaacatggagaaattgactgggaagcagttgtaaagctgtctgatgatttcaacggtgcagatct gagaaatgtgtgtacagaagcaggtatgtttgccataagagcagagagagattacgtgattgaggaggactttatgaaag cagtaaggaaagttgctgataacaagaaactggaatcaaagcttgactacaaacctatctaa |
|
Protein
| Protein ID | pfu_aug1.0_1524.1_66011.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1524.1_66011.t1 IVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTVMRYLPREVDPLVYNMSIEDPGDVSYNQIGGLGEQIRELREVI ELPLMNPELFQRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFAFARDHEPCI IFMDEIDAIEIPLPNEQSRLEILKIHAQPIAKHGEIDWEAVVKLSDDFNGADLRNVCTEAGMFAIRAERDYVIEEDFMKA VRKVADNKKLESKLDYKPI |
|