Gene
| Gene Model ID | pfu_aug1.0_1526.1_07993 |
|---|---|
| Locus | scaffold1526.1 : 19716 ... 20893 : + |
| To GenomeBrowser | scaffold1526.1:19716..20893 |
| Genes list of scaffold | scaffold1526.1 |
| Synonym | pfu_aug2.0_701.1_04488 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1526.1_07993.t1 | 1 | 1 | HlyIII | 59 | 271 | 4.6e-25 | 88.3 | 8.1e-29 | 6.0e-25 | 87.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1526.1_07993.t1 | gi|72058996|ref|XP_784040.1| | PREDICTED: membrane progestin receptor beta [Strongylocentrotus purpuratus] | 1.99993e-41 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| trochophore | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_1526.1_07993.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1526.1_07993.t1 atgatgaagaaggttagagacctgttgctgtcatacatcagtgatgctcagcatctattacacaaacaaaggaccttcaa agtctcggaggttcccgtgttgttccgggagcccagcgtattgaccggatacagagagatgaacaagccgttggcatact acctactgagcacatttcagcttcacaacgagactttcaatatttggacacatcttgtggcattcatactggtcattata aaactttactcagcgtactacgccttggacgagtatgaggaatatcaacctgtggtactaggattcggcatctgctgcat gttttacaccttcctaagcactcttgctcatatgctacagacgaaatcggattttatgcattacacggtttaccatttgg attttgcaggtattgggttctacatgctgggtacaagtattaacttgtactacgccagctgccacgccgagtattaccca ctttttgagatgtcattcttgccatttgtagtgataatgagttggtttgggtgcttttgttcttgcttcgctaaactgaa gtacagacgaccttatccgttcacccgaaaactgtggaatatatgttctttcggaacacaaatcgtgtgtgttttttcac tagttattctacgatacgttgactgttacagagattctgaatgtactctagcatcgctcaatcaccataccagagtggta tcccttgtgttgttgtcgatgttcttcttctgcagtttcataccagaaaaattttaccccggaaaatttgacattctcgg aatgagccatcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnacaaaaataaaattagttccggcccggggacggaaaata aaatactgtcncaccaaaaccaaaaccacgcccccccccagaatatcaaatggaccgtgcctaaaacagtattgaaacct aaaacccttcgaggaaaatggctatcttgtatagaaactcagaataagaatcgttgttttgacagattaggctag |
|
Protein
| Protein ID | pfu_aug1.0_1526.1_07993.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1526.1_07993.t1 MMKKVRDLLLSYISDAQHLLHKQRTFKVSEVPVLFREPSVLTGYREMNKPLAYYLLSTFQLHNETFNIWTHLVAFILVII KLYSAYYALDEYEEYQPVVLGFGICCMFYTFLSTLAHMLQTKSDFMHYTVYHLDFAGIGFYMLGTSINLYYASCHAEYYP LFEMSFLPFVVIMSWFGCFCSCFAKLKYRRPYPFTRKLWNICSFGTQIVCVFSLVILRYVDCYRDSECTLASLNHHTRVV SLVLLSMFFFCSFIPEKFYPGKFDILGMSHXXXXXXXXXXXKNKISSGPGTENKILXHQNQNHAPPQNIKWTVPKTVLKP KTLRGKWLSCIETQNKNRCFDRLG |
|