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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_152789.1_13969
Locus scaffold152789.1 : 8 ... 941 : +
To GenomeBrowser scaffold152789.1:8..941
Genes list of scaffold scaffold152789.1
Synonym pfu_aug2.0_3427.1_25747

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_152789.1_13969.t1 1 1 DNA_pol_B_2 5 133 2.1e-10 39.9 1.9e-14 2.8e-10 39.4

Transcript
Transcript IDpfu_aug1.0_152789.1_13969.t1
Definition-
>pfu_aug1.0_152789.1_13969.t1
atggcgcctgccaaattaccaaaggcgtttcaactcgattccttggcaaaaggatattatccccattttttcactagcca
aagaaatctgaactacatgggaccctaccctcccaatgcgatgtccgtcgaagagagggaaaaatttctcacgtggtcca
agatggaaagtaacgaagtcttcgattttcggaaagagatgatcaagtactgtaagagtgacgtagacatcttacgtcgt
gcctgtctcaagttcaaaaacctcttgaatgacgtcacccaacaagacggcgggtcaggcatagatgcatttgcatgcac
taccattgcgtcactttgcatggacgtgtttaaaaccaaatttttactcgaagattggaaagtactggtcggtgcaccgg
tggcccccaacgagccaaccaacaatgtctgccaaagtatagacgaccaagagacatggctggatgccgtcaaaattaac
ggaacattcacggtgtttcacgatggagtgtggaagagaccccaagccttgaagcagcaaactggtcttgaaatcaagaa
gaccgtctttgtgaaatcaccgattgccagaccaccacctagcggttatgcgtcaatgaccaggttcagtaaaaaatcta
ttcagtggttggaatggatcatgcatcgggaaagggtcaagggtcacacgtttgaaattcaacatgcactcaacggtcgt
ggcgagtaccgagttcccgggacaaagtattccctagacggttatgctcctgctcatccaaaacacccgggatgcgtggc
gtacgagtttcacggatgtcgttatcacgattgtccttactgttttaaaaggaagggcgatattcccaaccccatcaccg
gtcatacggctttggagctgttaaacatgacgcgcgtcaaagaagacacgcttc

Protein
Protein IDpfu_aug1.0_152789.1_13969.t1
Definition-
>pfu_aug1.0_152789.1_13969.t1
MAPAKLPKAFQLDSLAKGYYPHFFTSQRNLNYMGPYPPNAMSVEEREKFLTWSKMESNEVFDFRKEMIKYCKSDVDILRR
ACLKFKNLLNDVTQQDGGSGIDAFACTTIASLCMDVFKTKFLLEDWKVLVGAPVAPNEPTNNVCQSIDDQETWLDAVKIN
GTFTVFHDGVWKRPQALKQQTGLEIKKTVFVKSPIARPPPSGYASMTRFSKKSIQWLEWIMHRERVKGHTFEIQHALNGR
GEYRVPGTKYSLDGYAPAHPKHPGCVAYEFHGCRYHDCPYCFKRKGDIPNPITGHTALELLNMTRVKEDTL

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