Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_1528.1_51326
Locus scaffold1528.1 : 42089 ... 51325 : -
To GenomeBrowser scaffold1528.1:42089..51325
Genes list of scaffold scaffold1528.1
Synonym pfu_aug2.0_216.1_20435

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_1528.1_51326.t1 1 1 Metallophos 24 168 3.0e-06 26.7 1.0e-09 7.4e-06 25.4

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_1528.1_51326.t1 gi|45331967|gb|AAK91292.2|AF395860_1 adult brain protein 239-like protein [Branchiostoma belcheri] 0.0

Transcript
Transcript IDpfu_aug1.0_1528.1_51326.t1
Definition-
>pfu_aug1.0_1528.1_51326.t1
atgaagggacaaatcggagagatcatgacatttaatgcgtatctaggttccctgcctcacacctgtaaaattgtgatagc
tggaaatcatgacgtcacatttgacgatgaagttctatcaggtcctaaagctgtcgcattcggtgtccgaaaaagggaat
tccagaagtgcctcgatgagttggatgtcaaaaaggtccaacaattgctgacaaaatgtatttatttacaagattcatct
attcaactctgtggaataaatatccatggatctccatggcagccagtattctgtgactgggctttcaatctaccgagggg
tgacgatttactgcaaaaatggaatctcattcctaaaaacactgatatactaattactcatggacccccagtaggatatg
gtgatacaactaccggcaataataacgtgggctgtgtagagctgttaaacacggtacaaaaacgagttcaacctaagttc
cacgtatttggtcacatccatgaagggtatggtaaatggtttgatggcacaactacgtatataaatgcttcaacatgtaa
caagaaatacagacctgtgaatcaaccaatcgtatttgactatcctatcccagaaggccacagcaaagatgaactcctta
aatatttacgaaagcataatgcacaaagttga

Protein
Protein IDpfu_aug1.0_1528.1_51326.t1
Definition-
>pfu_aug1.0_1528.1_51326.t1
MKGQIGEIMTFNAYLGSLPHTCKIVIAGNHDVTFDDEVLSGPKAVAFGVRKREFQKCLDELDVKKVQQLLTKCIYLQDSS
IQLCGINIHGSPWQPVFCDWAFNLPRGDDLLQKWNLIPKNTDILITHGPPVGYGDTTTGNNNVGCVELLNTVQKRVQPKF
HVFGHIHEGYGKWFDGTTTYINASTCNKKYRPVNQPIVFDYPIPEGHSKDELLKYLRKHNAQS

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495