Gene
| Gene Model ID | pfu_aug1.0_15333.1_54175 |
|---|---|
| Locus | scaffold15333.1 : 3453 ... 32215 : - |
| To GenomeBrowser | scaffold15333.1:3453..32215 |
| Genes list of scaffold | scaffold15333.1 |
| Synonym | pfu_aug2.0_922.1_08011 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_15333.1_54175.t1 | 1 | 1 | HSP70 | 4 | 344 | 1.6e-34 | 118.8 | 1.1e-37 | 2.0e-34 | 118.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_15333.1_54175.t1 | gi|47223815|emb|CAF98585.1| | unnamed protein product, partial [Tetraodon nigroviridis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| trochophore | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_15333.1_54175.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15333.1_54175.t1 atggcacaggttgagggtcttttggaggacatagattttaaggcgaaggtgtctagagaagaatttgaggaaatgaataa agatttatttgagagagctctgaacccaattaaagacgctcttaaagtttcacagataacactgggtgagatttctgacg ttattttgatgggaggtggtacacgagtacccaaaatacaagatcttctgttaaagttccttggaagaagtggattgggt aagagtattaacacagatgaggccgcggcgctcggagccgtttatcatgctgctcatctcggaaaaggattcaaagtcaa aaagtttggtgtcaaagaggcgtgtctatatccaatagtggtggagtttgagaaacagaaagaaggtgaggagacgtcca agacagtacgacgtacgctttttggtcgtatgaatccatacccccagaagaaggtcatgacctttaacaagcacttcaag gacttcaacttcaatgtctcatatggagatctgtcgttccttacagacgaggagttaaagatgtttaaagagcctgctat acattcattttcactgtctggtgtagaaacagcccataccaaacataaggaaaaagcagagagtaaaggtgttaaagctc acttcagaatggacgaaagtgggattctacatctagacacggctgaggcggtgtttgagacggaaggagatgcaaaagaa gaatccacttggtcaaagttaggcgataccatcagtgggctgttcggaggctcagacaaaaaagagaagaaagacgaagg tgccgaggagcaaggggataactctggcaagccaacagagggcgcttccaataaagagaaaacaactacccaggattccc agaaggaggacagtgaaaagggagggaatgataaaaccaaagaaaaggtatacaccggcaaactttcggaacttaaaaag ttaacgaaggatttagaattccgtgtgaaggagtacaaggagagacctaaagctctggaggccctacatgacatgattaa tagtacagagttcttcttagtgacgcttaaaaatatgtctcagttagaagagcccatatttactgaagtggaaattacga cgctatcaaaattaataaatgaaacaaagtatagcggtgaagatgccgtgggtttccgacgatgcgagaatgggaaacaa aagggaaccaccagggagcatgcagaatccctgcgcacctacaagcgcagtcccctttccataacgcccttcccccttaa cttaccttggttttatattcagcattttgatagaagacagttgaaagtttggatctgttgtacgacaattaagggtatca taacgagaacaatgttactagtaaatgtgagtgaagatggctgtgacgattttaatagttccgatagtttatttgacgat ggagattattacgattactattattattattttcgggaatattatttcacagaagaagagcggaaaagatttaattgtac agatagctatccaaactataggatggtattgactttacttctaaaccaagacaatttgcttgctattaagctttctgtcg ttggacttcttttccttggattattaggcaatgcaataactattatcaaagtgttgtgtgataaaactttacacacaccg acatacacattggtcgtctgcttggcagtgtgtgatatactgaaccttgtcttaacatatgttgtgtattacacaaacct gagagactacttggacttcacatttcggacaaaagtcatcacaatttacatggaattgtacatgggtccttgtgatgtgc cgaactggactggtcctggtgatgtgccgaactggactggtcctggtgatgtgccgtacgggactggtcctggtgatgtg ccgaacaggactggtcctggtgatgtgccgtantag |
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Protein
| Protein ID | pfu_aug1.0_15333.1_54175.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15333.1_54175.t1 MAQVEGLLEDIDFKAKVSREEFEEMNKDLFERALNPIKDALKVSQITLGEISDVILMGGGTRVPKIQDLLLKFLGRSGLG KSINTDEAAALGAVYHAAHLGKGFKVKKFGVKEACLYPIVVEFEKQKEGEETSKTVRRTLFGRMNPYPQKKVMTFNKHFK DFNFNVSYGDLSFLTDEELKMFKEPAIHSFSLSGVETAHTKHKEKAESKGVKAHFRMDESGILHLDTAEAVFETEGDAKE ESTWSKLGDTISGLFGGSDKKEKKDEGAEEQGDNSGKPTEGASNKEKTTTQDSQKEDSEKGGNDKTKEKVYTGKLSELKK LTKDLEFRVKEYKERPKALEALHDMINSTEFFLVTLKNMSQLEEPIFTEVEITTLSKLINETKYSGEDAVGFRRCENGKQ KGTTREHAESLRTYKRSPLSITPFPLNLPWFYIQHFDRRQLKVWICCTTIKGIITRTMLLVNVSEDGCDDFNSSDSLFDD GDYYDYYYYYFREYYFTEEERKRFNCTDSYPNYRMVLTLLLNQDNLLAIKLSVVGLLFLGLLGNAITIIKVLCDKTLHTP TYTLVVCLAVCDILNLVLTYVVYYTNLRDYLDFTFRTKVITIYMELYMGPCDVPNWTGPGDVPNWTGPGDVPYGTGPGDV PNRTGPGDVPX |
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