Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_1537.1_66018
Locus scaffold1537.1 : 26436 ... 58262 : +
To GenomeBrowser scaffold1537.1:26436..58262
Genes list of scaffold scaffold1537.1
Synonym pfu_aug2.0_301.1_03965

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_1537.1_66018.t1 gi|318065119|ref|NP_001188273.1| solute carrier family 43 member 3 [Danio rerio] 1.0e-19

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 2
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_1537.1_66018.t1
Definition-
>pfu_aug1.0_1537.1_66018.t1
atgcattgttacgtcacgagcgttttcatgcaaaatgaaaacacgttcctttcaatagtttatctcacagggaagtacat
gggttgtggattatattttgaaatactagtttatgttctaacgtgtaaagtgcgcagggctcgcttgcctcggtcaactt
accagaaaattcggaaccagaatcacgagagcaatattcatgttgcaaatttgttccacactataaaaacgacggttgta
gcggttttgtcaggcttatttgatgtatcgtctatgactcaacaattagttaagattgcacatgaaaatggagcaagtag
aaaggagagttatctcatcattacgttagtgtctgtcttcacgtttgcagttagtacatttttgttacttccaaaagatt
acatcttaggacgaaataaaaaggttggacagcaggtgaaaagctacgataaagatattccaaatcatgagctgcaaagt
ctaaaagttagtacatttttgttacttccaaaagattacatcttaggacgaaataaaaaggttggacagcaggtgaaaag
ctacgataaagatattccaaatcatgagctgcaaagtctaaaagacaaagcagatattgataaacgaccagagggtacca
gtttgacgtcatgcatgatgtccgtaacatatgtgagccatcttgtatggttcggcttaaatatgatgatgttcgtatct
ttcattggattgctcaatgtatggttggaaagattaaccaactatcgaaaacaggaagttggatttctgtatgatagttt
aagaaaggctttctcaggcaaacatccaccagagtccacccataagccagctgtgattcctcagttgatatgtggtttga
ttgcagcctctatgtttttcattcctctatctgagtccttagatctgatgattctagttttcatcttattcacgatgttc
agatcattcgctttctcaatagggataggattccttaacgaggccttccctccacagcattttggtgcattgtacggtgt
cgctacattcaccaacgggctgttcagcttatttcagtatggtttatttgagtggaataaatcataccctggggcactta
ttcatgtgaatattttcctggggtgtataggattacttacttgtattcaacctgtgattctctggatacggagtcataat
ggtcatgtttacagccagacctacaacgaagaacttattatccaaaataataattgtcaaaaactgtga

Protein
Protein IDpfu_aug1.0_1537.1_66018.t1
Definition-
>pfu_aug1.0_1537.1_66018.t1
MHCYVTSVFMQNENTFLSIVYLTGKYMGCGLYFEILVYVLTCKVRRARLPRSTYQKIRNQNHESNIHVANLFHTIKTTVV
AVLSGLFDVSSMTQQLVKIAHENGASRKESYLIITLVSVFTFAVSTFLLLPKDYILGRNKKVGQQVKSYDKDIPNHELQS
LKVSTFLLLPKDYILGRNKKVGQQVKSYDKDIPNHELQSLKDKADIDKRPEGTSLTSCMMSVTYVSHLVWFGLNMMMFVS
FIGLLNVWLERLTNYRKQEVGFLYDSLRKAFSGKHPPESTHKPAVIPQLICGLIAASMFFIPLSESLDLMILVFILFTMF
RSFAFSIGIGFLNEAFPPQHFGALYGVATFTNGLFSLFQYGLFEWNKSYPGALIHVNIFLGCIGLLTCIQPVILWIRSHN
GHVYSQTYNEELIIQNNNCQKL

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495