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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_1537.1_66019
Locus scaffold1537.1 : 68416 ... 80945 : +
To GenomeBrowser scaffold1537.1:68416..80945
Genes list of scaffold scaffold1537.1
Synonym pfu_aug2.0_301.1_03963

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_1537.1_66019.t1 gi|118094525|ref|XP_422464.2| 5.0e-20

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 2
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_1537.1_66019.t1
Definition-
>pfu_aug1.0_1537.1_66019.t1
atgtttcgcactgagatcacttcgcgtcaaattaacttcaacagcgacaatagattttctgaaccattatcgatagttgg
cgactttcaactttcagcgacgatagcggcaacattggcgactatggcattcactggcctagaagatatcgaaacctgca
tcggtattctggaacagaatgattgggacttgatgaaatcggtcaccagtgttatgccaggaaatgatggaggcaatatt
tcaccgtcaggcggggaacctccccctatatattccccaatggatgtagaggacataagtcccccgccttatccgaaatc
tagttttgtcggagatgtggcagatgccgtaccgatcttcgatcctagttctgctgctgggccgtcaacgtcggcggcta
ttccatcaacaagctttgggtcagcaaagaaaagtcgatctggtggaggagctagaattctgaattttaaagttgaatac
agagatcagaatgtgtatctcagtgtcccagacacagaacctaaaatacttcaagagctacatttaccaaaggagaatac
cttattcctgcttaccccggacatacctaatcctacactgatcaagccaagacaagaaaatgacgatttagaaaatttaa
cactgactgaggctctcaacagaacctacacattacacataactttctctgacaatggacggagtaacacctacaatctc
aacatgcagggatgtaaaacaattggcgagatgacactgggatgttgtggattgagcatccctacacataaactacagct
cactaagtcaaatattgtatgccggccaagaagaaatgatgtagatatcgacctagagaacagtgatgacgatgatgaca
tgaacgcatcgatagacgacgagctgtttgatcaagacgacagaatagcaaacaaacaaactctcctcatgcctgaatca
gtcaaagatgaggtagatgctttggaacattttaccaaagaattcagggaaaggttgatcaccatggttacgaggcactt
tggtaatgtggtggctggtcagatacgaggtcacagacccgatcagcttcctatgatgatgattatatctaggtcaaggg
caacaaatgaagttgttgatatgatctcaggttctctgtcactggatgaagtgatgatgaggctaattcatgattctgaa
agcttccaggaacagcaaaaggcagacattcaagacgaggctgaagaacagaagaggttacaagaagaagagatacgaaa
acaaaagaggaggaaagtaaaaggcaagaggaagaacaacgaaaaatggtaa

Protein
Protein IDpfu_aug1.0_1537.1_66019.t1
Definition-
>pfu_aug1.0_1537.1_66019.t1
MFRTEITSRQINFNSDNRFSEPLSIVGDFQLSATIAATLATMAFTGLEDIETCIGILEQNDWDLMKSVTSVMPGNDGGNI
SPSGGEPPPIYSPMDVEDISPPPYPKSSFVGDVADAVPIFDPSSAAGPSTSAAIPSTSFGSAKKSRSGGGARILNFKVEY
RDQNVYLSVPDTEPKILQELHLPKENTLFLLTPDIPNPTLIKPRQENDDLENLTLTEALNRTYTLHITFSDNGRSNTYNL
NMQGCKTIGEMTLGCCGLSIPTHKLQLTKSNIVCRPRRNDVDIDLENSDDDDDMNASIDDELFDQDDRIANKQTLLMPES
VKDEVDALEHFTKEFRERLITMVTRHFGNVVAGQIRGHRPDQLPMMMIISRSRATNEVVDMISGSLSLDEVMMRLIHDSE
SFQEQQKADIQDEAEEQKRLQEEEIRKQKRRKVKGKRKNNEKW

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