Gene
| Gene Model ID | pfu_aug1.0_15375.1_46875 |
|---|---|
| Locus | scaffold15375.1 : 1 ... 16543 : + |
| To GenomeBrowser | scaffold15375.1:1..16543 |
| Genes list of scaffold | scaffold15375.1 |
| Synonym | pfu_aug2.0_3863.1_12532 |
Manual annotation
| Study field | Biomineralization |
|---|---|
| Gene name | Chitin synthase like protein |
| Description | Chitin synthase like protein, hit to BLAST (NCBI, AAQ55059.1) |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_15375.1_46875.t1 | 1 | 1 | Glyco_tranf_2_3 | 233 | 341 | 5.0e-08 | 33.0 | 1.8e-11 | 8.9e-08 | 32.2 |
| pfu_aug1.0_15375.1_46875.t1 | 1 | 1 | Chitin_synth_2 | 247 | 352 | 1.2e-16 | 60.1 | 5.6e-20 | 2.8e-16 | 59.0 |
| pfu_aug1.0_15375.1_46875.t1 | 1 | 1 | Glyco_trans_2_3 | 252 | 342 | 2.7e-09 | 36.9 | 5.6e-13 | 2.7e-09 | 36.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_15375.1_46875.t1 | gi|33867317|gb|AAQ55059.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_15375.1_46875.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15375.1_46875.t1 gttttgggacatatttcaaatcatcgccagagagaaccctgaacaagatgtacatacccatatgagtctacgtatcatca agtttataacgtacatacttctgtttgcgatcctcttggcttcactcgtcgtccagaaggtcacgttcattgtcctggcc acaaatggaacagcggttcctgaaaaccccaccaacaaaaccagaatagaggtaaagtatatgtactatacagtgcttca agacagtgcgatcagatgtgacgtcataatggaaaattttgccaaagaatgtgatgtctggtatctattgtctgatgctg acatgagagcaggaaacaatgaagaggatgaaaaacgggatattaccattcccccgatgatttatgcatgtgcgacaatg tggcacgagaatcgacaagaaatggtgcagatcctgaagtccttatacagctcagtgtacagtaagcctatgacagtctc ccctccccttcgtataccatcgccatatggaggtcaactcgtcttcaaaatgcccggaaacaacctcatgttcgtacatc ttaaagacaaggttaaaatccgccacagaaagagatggtcacagaaagagatggtcaaagttaacatttttaattttgct gccaaagttatacaagtacatatttcaaaagttgtatatgggaaatgcattgcaccggtacggcaaattgaagacaaata tgatttacatttcaacatgtatgagaaagcaacggaacacgtgttgggatgtgtgctttgctctcccggctgcttcagtt tgttccgaggctcggctctcatggacgacaacattatgagaaagtatactataatgccgacagaagcctctcaccatctt atgtatgatcaaggagaggaccgttggctgtgtacactcttactacaacagggttaccgagtagactatgccgctgcctc cgatgcttacacgtacgctcctgaggcattcgacgagttctttaatcagagacgtcgctggatgccctcgacaatcgcca atatcatggatctattacaggacggcaaaaacactgagctggaagaagaagaaaaaaagaagaaggaagaagaagaaaag aaaaagcagggatggtttgctaggacattcggaaatgccaaacttacgtcagaactgaaggacttccttaaggaaatgcc tggccagaataaaaaggaagacaaaatgacggaactgctggtgcagttaaatgataatataaaatcacttgctaggaaag aaccgatacaggatgatgatgaactacaagaggtcaccgtggataaagcagagaaaaaatctcaaaagaaagtgacattc agagagtcaatacaggaaaaagagtttctagatgatgaagaagagtacatgtaccaaaaggccaaacggaagcgtaatga attagtagaccccgcctggaccgagtgtaaagaactaggggacggagataatatagtgatgaatcaggaagaatgcaggt tctgggaggggttcataggaaaattcaaagtgacgatgaagatgtag |
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Protein
| Protein ID | pfu_aug1.0_15375.1_46875.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_15375.1_46875.t1 FWDIFQIIARENPEQDVHTHMSLRIIKFITYILLFAILLASLVVQKVTFIVLATNGTAVPENPTNKTRIEVKYMYYTVLQ DSAIRCDVIMENFAKECDVWYLLSDADMRAGNNEEDEKRDITIPPMIYACATMWHENRQEMVQILKSLYSSVYSKPMTVS PPLRIPSPYGGQLVFKMPGNNLMFVHLKDKVKIRHRKRWSQKEMVKVNIFNFAAKVIQVHISKVVYGKCIAPVRQIEDKY DLHFNMYEKATEHVLGCVLCSPGCFSLFRGSALMDDNIMRKYTIMPTEASHHLMYDQGEDRWLCTLLLQQGYRVDYAAAS DAYTYAPEAFDEFFNQRRRWMPSTIANIMDLLQDGKNTELEEEEKKKKEEEEKKKQGWFARTFGNAKLTSELKDFLKEMP GQNKKEDKMTELLVQLNDNIKSLARKEPIQDDDELQEVTVDKAEKKSQKKVTFRESIQEKEFLDDEEEYMYQKAKRKRNE LVDPAWTECKELGDGDNIVMNQEECRFWEGFIGKFKVTMKM |
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